Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo10g2568 ATGTATCATCAAGTGAGCCATGGCCCTTCTTTAGGACAAGGTGGTTCTCACCCTCCTCCGCCGCCTCCGCCGAATGCTTATCAACAGCAACAACCTCCGCATCATCATCATAATCGTAATCCTCCACCTCCACCACCACAGTTTCAGCAGGGTGGTCCTATTCCGGTTCCACAAGGTCATCATATGTACCTACATGGTCATGGACCACCCAATGCACCTTCCACTAGTTCTGTGAATCTTCCCTTTCAAGCTCCACCTGGAATGGTGCAAAGTGCAGGGCAGTATGGGAACGGCATGGCGGCACAAACATTTACTAGCGTTGGACAGAATTTAGGGGCTCAGAGTCATCACATTCCGCCATCTCCTCCTCCTGTGCCACCATCTAGAGCACTACCACCTCCGCCGCCGCTGCCTGCATCTTCCCAGGGGGAAATTTTGTGTAAACCTCCTTTTGGTCTGCCTCCACCACCCCCTGCTGGATATGTTGGGAATTATCAAGTTCCTCCTGTTGCTCCCCCACTGCCGCCACTGCCATCCTCTCCACCGCCTATTCTGCCCCCTGCCCCTCCTATGACTTCCACCTCTGGCGAGGTTTCTGGCACTGAGTTGAAGGCTGTGGATTCGGTTGAAAAAGGTGTGGCTTCCTATCCATCTGGTATTGCACCTATATGCAATTATGATCCTAATGGGGAGAGTGGAAGTTGCAGAGAGTTTGCTGCTTCTGCTGATAGAAATGAACTATTGTCAAATAAAAGTGGAAATTTGGATCCTCCCCCACCTCCGCCATCAGAAGAAAAAACTGTTCAGAAGATTGAAGCTTTATGTCAGCTTATTGCTGAGAATGGTCCTGATATTGAAGACAAGATTCGTCAAGAGGAGTTTCAGAATCCTGAGTATCAGTTTTTGTTTGGTGGTGACCGAACTGAAGCTGCAATCTCCCACACGTATTTCCTCTGGATGAAGAAGAAATACAATTTGGAAGATAGATGGCATGAGAAGAAAGCTGAACCACAGTTAAGACCTCTATCAGTAGACTCACCGGGGCCACTGCATCATCTGCATGTTGCAACCGAAAATGCTGATTCTGACATGGAGATGGAAGATGATATCACTCTTTCCGACAAGGACCAGGGACCAAATTATGCAATTGAAGCTCTAACTCAGCAGCCTCATCAGGTTGGTGAGGAATGTAAAATGAATGAGAATACACATCAGTTGCAGAATTCAACAGAGAACGATCCCTCCAACGACATCTTAGCCAGTGATGCATCAACACGTGGATCCATGGGAATCGGCAACCAACATGAAGGACCTGGGAATATCTCCAATTTTGAGCAAATGAAATCTGCAATATCAGTTACCAAGGTTCATAGTCCTGTGAATGGATCAAGTGAAGTGGCTAAAGTCCCCCTTGGCACAGGTTTTGAGAAATCTGCAGCTCCTCTAGCAGAAGGTTTTATTCGAAATGGGACTTCTGATCTTGTGGAAGCCATTGATGCTGATAGAGATTCTGGACAACTTATAAGGAGTGGCAGCCCAATAAAGCTACTTCAAGATTATGCTTCTGATGATACTTCAGGTAATGAAGATGAAATATCAGCAGGAGCTGCCAGTGGTGTTTCAATTGCGCATAAAGATTCCAGGAGTCGCTTAGAGACTGATATTGGATCCAAGACTCCCTCCGGTACACAAAAGGGGTTTGGACAGCTCTCTGAAACAACTCTGGATAATTTAGTACAAAAATCTAAGGAACTCATTGAAGATTACCATGAAAATCAGGTGTCTGTTGCTGCTTCCTATGAAACCATCGCAGTGAAAGATAAGTTAGGTAGTAAAAGTAACAATGCTGAACCGGAGGATGAAAGGAAATCCTCAAAGTTTGAAAAGAATATCTTGAAGGTAGATAAATTTGGAAGGCATCCCAAAGAAGCTCCTACAGATAGTGACTCCGAGTCTGATGATTCTCACTATCGTCAGACTAAGAGGGGAAGCAAAAGAGGCAGAGGGAGGAGTCACAGCAGATCTCCTGAACACAGAAGTCGGAGTAGGAGTAGGAGGAGGAGAAAGAGTCCCCGGAGGAGAAGGGATAGAAGAAGCCGATCTCGAAGCCGGTCTCCACGATATCGTAGAAGCAGGAGTAGGTCTCCAATCTTAAGACGAACAGGGGACTTTGGTGGTGAGAATGTGAAAAGGGACAGGGGCCAATGCTTTGGCTTCGTTCGGGGAAAGTGCCATCGTGGAGCATCTTGTAGGTTCTCTCACCATGAATCTGACAAGAATGTTAGTTTGAGGCGCCATAGGAATAAATATGACCAAGAAGTCCATTCTCATGCAAAACATGTTAGTGATGGTATAAGAAGTCAGGGTGTGGATCAAAAGCAGGAGACAAATGAAAAAGAAAATTCTGTTAGGTATGCAAATCTGCCTAATACTTCTGGTATTGACAGTCAATCAGTAAGGAATGATCCAATTAAATCTGAAAGTTTCAGAGAGAGTGTTCTTGAAATGAAGGAAAGTTTGGTTGGTTTTCTTCCTGAAGTTTTAAGTGGTGATGATGCCTCTAAACCATGTGATGGCACAAATGAAGATGGTGTTCATGCAGAAGATAATTCATTTGTTCACAAGATACAACCCAATGTTCCTGTTGGAATTACAGAGCATCCTAGTTACTCATCTAGTATCCAAACTTTACCATATATGTTACCACCAACTCAGCCATTGTCTGCCCCTGGCTCTGTTGGTCCATCACCTTCATCAAGACGGCCTTTATTACATAGTATTTCCTCGGTGGAATTACCACCTCATGCTTACCAGTTGCCTCCCCCACCTGTTGTTTCACATGCACAGGGTGAGAATGCTGTGATTTTGCCACAAATTTCAAGGGACTATGGTGTAACACAACAAAATGCATTATTCCCTTTTCAGCCCACTACTAGTGATAAATTTGAACCTTCCCCAGCTCTGATTCACATGCAGAGTCCTCACTTCAGTGTACCACTACCACCTAATTACCCTTGGACATCATTGCCGCTACCACCACCTCCTCCTCTCCCTTCACAAATTGTGCATAATCCCAGCATAGGTTCCGGAGTTTCAACATCATATGTCTCTTCAGAATTTAATCAAACTCAATTGCATTCAAGAGGGGACTTTGTTTCTCTGACTTCTGGTAAGCCTGGATTGGCTTCTCATTCTCAGAGTTCTGAGTTTCAGGATCATGCCTACCCAGCAAATCAATTGCTTTCAGGTCCAAATGTTAGTGGAGAAGACCATTATAAGCAATTACCCATGCAAGATTCAAACCTTTCAAGCTCTGGTGGTTCACATCCTCTACAAAACCAATATTCCTGGCAGTCAGATGCTATCAGAATACAGCCTTCTGTTGGTGGGAATTTACCGCCAGAAGATCATTTCAAGACATCTTCCCACACACTTGCATCATCACAGCAGCAACAACCAGTGCATAGTTTTCAATATTCTGCATCTGAGGGTAATTTGGGTGTGCCTGGAGAAACTGTTACCTTATCTAGATATCCACCGGATGTTCTGGATAGCAATCATTCAACTTCTCTTCCAACTTTTGTGGGGTCAAGAATTCCTGCTCACTGTAATCCTTATGCTTCAACCTTTGAGCAGCCGCTTACTTCCAAACTCAGTTCAACTATTTTTAGATCAGAAAGTGATGTAATCCATGGCGACAATAATTCTGGGTTGAACCCTACTTCTATAAATAGGGAAGGCGCCGTTGGTGTTGAACCAAAGTCTTCTAGAGCTAATCAGTATGATCCTCTGTTTGACAGCATTGAACCACCATTGTCTTCTCTCAAGAAATTTGATTTTGAAAAACAGGAAGTTACAGGTGAATCCAATGTCAGCCTAAGGCCCAAAAGTTCTAATATGCCGTTGGATGCGGAAGAGCAAAATAAGCATGAGGAGGTTGGAGCTGTTGCCTCTACCACTTCTCAAAATAATGATGAATATGGTGAGACTGCAGATGCAGAGGTGGATGATGTTGAAAATGAGAGCCTAAGTAATCATGTGGATGTTGCAAACATGACTCCAGGGGAGGTTGAGATTAATCAGACCAAGTCTCCAGGGAAGAGAAAGAAGAGCAAGGATTCTAGATCAATGAAGTTGTTCAAAGTTTCCATTGCAAATTTTGTTAAGGAGGTTTTGAAACCGTCATGGCGGCAGGGTAATATGAGTAAAGTTGCATTCAAAACAATTGTGAAAAAAACTGTTGACAAGGTGTCAGGAGCCATGAAAGGCCATCGTATGCCCAAGTCCCAAGCAAAGATAAGCCAATACATTGACTCATCACAGCGAAAGTTGACTAAACTTGTGATGGGTTATGTTGACAAGTATGTCAAGTCATAA 4377 0.4409 MYHQVSHGPSLGQGGSHPPPPPPPNAYQQQQPPHHHHNRNPPPPPPQFQQGGPIPVPQGHHMYLHGHGPPNAPSTSSVNLPFQAPPGMVQSAGQYGNGMAAQTFTSVGQNLGAQSHHIPPSPPPVPPSRALPPPPPLPASSQGEILCKPPFGLPPPPPAGYVGNYQVPPVAPPLPPLPSSPPPILPPAPPMTSTSGEVSGTELKAVDSVEKGVASYPSGIAPICNYDPNGESGSCREFAASADRNELLSNKSGNLDPPPPPPSEEKTVQKIEALCQLIAENGPDIEDKIRQEEFQNPEYQFLFGGDRTEAAISHTYFLWMKKKYNLEDRWHEKKAEPQLRPLSVDSPGPLHHLHVATENADSDMEMEDDITLSDKDQGPNYAIEALTQQPHQVGEECKMNENTHQLQNSTENDPSNDILASDASTRGSMGIGNQHEGPGNISNFEQMKSAISVTKVHSPVNGSSEVAKVPLGTGFEKSAAPLAEGFIRNGTSDLVEAIDADRDSGQLIRSGSPIKLLQDYASDDTSGNEDEISAGAASGVSIAHKDSRSRLETDIGSKTPSGTQKGFGQLSETTLDNLVQKSKELIEDYHENQVSVAASYETIAVKDKLGSKSNNAEPEDERKSSKFEKNILKVDKFGRHPKEAPTDSDSESDDSHYRQTKRGSKRGRGRSHSRSPEHRSRSRSRRRRKSPRRRRDRRSRSRSRSPRYRRSRSRSPILRRTGDFGGENVKRDRGQCFGFVRGKCHRGASCRFSHHESDKNVSLRRHRNKYDQEVHSHAKHVSDGIRSQGVDQKQETNEKENSVRYANLPNTSGIDSQSVRNDPIKSESFRESVLEMKESLVGFLPEVLSGDDASKPCDGTNEDGVHAEDNSFVHKIQPNVPVGITEHPSYSSSIQTLPYMLPPTQPLSAPGSVGPSPSSRRPLLHSISSVELPPHAYQLPPPPVVSHAQGENAVILPQISRDYGVTQQNALFPFQPTTSDKFEPSPALIHMQSPHFSVPLPPNYPWTSLPLPPPPPLPSQIVHNPSIGSGVSTSYVSSEFNQTQLHSRGDFVSLTSGKPGLASHSQSSEFQDHAYPANQLLSGPNVSGEDHYKQLPMQDSNLSSSGGSHPLQNQYSWQSDAIRIQPSVGGNLPPEDHFKTSSHTLASSQQQQPVHSFQYSASEGNLGVPGETVTLSRYPPDVLDSNHSTSLPTFVGSRIPAHCNPYASTFEQPLTSKLSSTIFRSESDVIHGDNNSGLNPTSINREGAVGVEPKSSRANQYDPLFDSIEPPLSSLKKFDFEKQEVTGESNVSLRPKSSNMPLDAEEQNKHEEVGAVASTTSQNNDEYGETADAEVDDVENESLSNHVDVANMTPGEVEINQTKSPGKRKKSKDSRSMKLFKVSIANFVKEVLKPSWRQGNMSKVAFKTIVKKTVDKVSGAMKGHRMPKSQAKISQYIDSSQRKLTKLVMGYVDKYVKS* 1459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo10g2568 1458 Pfam Surp module 271 320 IPR000061 GO:0003723|GO:0006396
Amo10g2568 1458 MobiDBLite consensus disorder prediction 36 52 - -
Amo10g2568 1458 MobiDBLite consensus disorder prediction 1094 1113 - -
Amo10g2568 1458 MobiDBLite consensus disorder prediction 1285 1339 - -
Amo10g2568 1458 MobiDBLite consensus disorder prediction 772 800 - -
Amo10g2568 1458 MobiDBLite consensus disorder prediction 1125 1151 - -
Amo10g2568 1458 SUPERFAMILY Surp module (SWAP domain) 252 324 IPR035967 GO:0003723|GO:0006396
Amo10g2568 1458 MobiDBLite consensus disorder prediction 612 660 - -
Amo10g2568 1458 MobiDBLite consensus disorder prediction 95 116 - -
Amo10g2568 1458 Gene3D Surp module 256 328 IPR035967 GO:0003723|GO:0006396
Amo10g2568 1458 MobiDBLite consensus disorder prediction 1078 1113 - -
Amo10g2568 1458 MobiDBLite consensus disorder prediction 1352 1375 - -
Amo10g2568 1458 MobiDBLite consensus disorder prediction 232 266 - -
Amo10g2568 1458 ProSiteProfiles Zinc finger C3H1-type profile. 730 757 IPR000571 GO:0046872
Amo10g2568 1458 MobiDBLite consensus disorder prediction 1137 1151 - -
Amo10g2568 1458 MobiDBLite consensus disorder prediction 117 140 - -
Amo10g2568 1458 MobiDBLite consensus disorder prediction 554 570 - -
Amo10g2568 1458 PANTHER EXPRESSED PROTEIN 1 1457 - -
Amo10g2568 1458 MobiDBLite consensus disorder prediction 14 29 - -
Amo10g2568 1458 MobiDBLite consensus disorder prediction 661 715 - -
Amo10g2568 1458 MobiDBLite consensus disorder prediction 1313 1328 - -
Amo10g2568 1458 MobiDBLite consensus disorder prediction 519 570 - -
Amo10g2568 1458 ProSiteProfiles SURP motif repeat profile. 270 317 IPR000061 GO:0003723|GO:0006396
Amo10g2568 1458 MobiDBLite consensus disorder prediction 173 190 - -
Amo10g2568 1458 PANTHER PROTEIN FRIGIDA-ESSENTIAL 1 1 1457 - -
Amo10g2568 1458 MobiDBLite consensus disorder prediction 772 823 - -
Amo10g2568 1458 MobiDBLite consensus disorder prediction 801 823 - -
Amo10g2568 1458 MobiDBLite consensus disorder prediction 1 152 - -
Amo10g2568 1458 MobiDBLite consensus disorder prediction 173 199 - -
Amo10g2568 1458 MobiDBLite consensus disorder prediction 70 84 - -
Amo10g2568 1458 MobiDBLite consensus disorder prediction 605 731 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo10g2568 Amo-Chr10 88528953 88536082 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Amo10g2568 Surp 3.7e-05 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo10g2568 - - ahf:112784154 2489.53