Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo10g2565 ATGGAATTTGATAATGGTGACAAGCGGCGGCGAAGCTGCGAATTCCGAGAGCTCAAGGTGGTTACCTTGGCTGCTATATGCTTTATGATACTTTCTCAAGCAGATGCATTTGATCCATTGGATCCAACTGGGAATGTGACAATAAGATGGGATATCATGTCCTGGACAACAGATGGCTATATGGCCACTGTGACAGTGTTCAACTTTCAACAATACAGGACAATCATGAACCCTGGATGGACAATAGGGTGGACATGGGCAAAGAAAGAGATAATATGGACAATGATGGGAGCTCAAGCAACAGAACAAGGCGACTGTTCCAAGTTCAAGTTGAAGATCCCACACAGCTGCAAGAGGAACCCTCAGGTTGTTGACTTAATGCCTGGAGCACCTTTCAACATGCAGTTCAATAACTGCTGCAAAGGTGGTGTCCTAACTTCTTGGGGTCAGGACCCTTCCGGCGCTGTCTCGGCTTTTCAGATAGGTGTAGGCCTCTCTGGCACCTCTAACAAGACAGTTAAGCTTCCCAAGAACTTCAAGCTTCTCGGTCCAGGGCCAGGCTATTCCTGTGGCCCTGCTAAGCTTGTGCCTGCCACTGTCATCCCAACCGATGATCGTAGGAGAAAAGCTCAAGCTTTGATGTCTTGGAATGTGACATGCACTTATTCGCAGTTTCTAGCCTCCAAGAATCCAAGTTGTTGTGTTTCTTTGTCATCTTTCTATAGTGACAAAGTCACAGCTTGTCCAACCTGTGCTTGTGGTTGCCAAAATAATGATACCTGTGTCACGAAGGACTCAAAGTTACTACAAGAAGATGAGAGAGTAAAGACTAAGAAGAGTGATATGACACCAAAACCATTGCTACAATGCACACACCACCTTTGTCATGTGAGGGTGCATTGGCACATCAAAGACAACTACCAAGATTATTGGAGGGTCAAGATTGCCATCATCAACTTCGACTATCGACTCAATTACACTCTATGGAACCTTGTTATTCAACACCCCAATCTCAACAATGTCACACAAGTCTATAGCTTTGAATACATGCCACTTCTTCCCTATGAAGCCATAAATGACACAGGAATGTTCTATGGTTTGAAGTACTACAATGATCTATTGATGGAAAATGGGCCTAAAGGGAATGTGCAATCTGAGATTCTTATGAAGAAGGACAAGAACACATTCACACTCAAGCATGGATGGGCATTTCCAAGGAGGGTCTACTTCAATGGTGAAGAATGCATGCTGCCACCTCCTGATTCATACCCTTTCTTGCCAAACTCTGCTCATAGACTACTGATTAGTGCTTCGTCGATAGTAGCCAGCACCATTTTCGCATCGTTTTTCATTTGGTTGTGA 1362 0.4442 MEFDNGDKRRRSCEFRELKVVTLAAICFMILSQADAFDPLDPTGNVTIRWDIMSWTTDGYMATVTVFNFQQYRTIMNPGWTIGWTWAKKEIIWTMMGAQATEQGDCSKFKLKIPHSCKRNPQVVDLMPGAPFNMQFNNCCKGGVLTSWGQDPSGAVSAFQIGVGLSGTSNKTVKLPKNFKLLGPGPGYSCGPAKLVPATVIPTDDRRRKAQALMSWNVTCTYSQFLASKNPSCCVSLSSFYSDKVTACPTCACGCQNNDTCVTKDSKLLQEDERVKTKKSDMTPKPLLQCTHHLCHVRVHWHIKDNYQDYWRVKIAIINFDYRLNYTLWNLVIQHPNLNNVTQVYSFEYMPLLPYEAINDTGMFYGLKYYNDLLMENGPKGNVQSEILMKKDKNTFTLKHGWAFPRRVYFNGEECMLPPPDSYPFLPNSAHRLLISASSIVASTIFASFFIWL* 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo10g2565 453 PANTHER PROTEIN COBRA 1 453 IPR006918 GO:0010215|GO:0031225
Amo10g2565 453 PIRSF COBRA 11 453 IPR006918 GO:0010215|GO:0031225
Amo10g2565 453 Pfam COBRA-like protein 60 223 IPR006918 GO:0010215|GO:0031225
Amo10g2565 453 PANTHER COBRA-LIKE PROTEIN 1 453 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo10g2565 Amo-Chr10 88482783 88485012 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo10g2565 48 436 COBRA Gene Family AT5G60920 63.104 0.0 562
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo10g2565 - - gmx:100813134 805.823