Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo10g2522 ATGAACCACTCTTCAGCAGATCATGATCGGGATCAGTACCTAAAGAAGCGAAAATCGAGTGCTGATTCCTCGTCAAGCATGAGGAAATCCAGCGCAAGGAGAAGATTCAGCAGCAGCAAGAATTCGAACAACAACGACGGAGGCGGAGGCGGAGGCGGAGGCGTGTCGACGACGCTGAAGCTGTACGACGATCCATGGAAAATAAAGAAGACGTTAACGGACAGCGACCTCGGGATCCTGAGCAGGCTGTTGCTGGCAGCTGATTTGGTGAAGAAGCAGATCCTTCCGATGCTGGGCGGCGATGACGCTCGAGCGGCGGAGACGGAAGAAGGAACTCCGGTGAGAGTGTGGGACATGGACACCAGATCCATGCACCACTTGGTCCTGAAGCGTTGGTCATCTTCCAAAAGCTATGTTCTTATTGGAAAATGGAATCAAGATTTCGTCAGAAGACGGGACCTCAAGAAAGGTGATGAGATTGGCTTCCACTGGGATCCCTATAACTGCGCCTTCAACTTCTGCGCAAGGGCACTGCGCTGTGCATTGCTACCATAA 555 0.5225 MNHSSADHDRDQYLKKRKSSADSSSSMRKSSARRRFSSSKNSNNNDGGGGGGGGVSTTLKLYDDPWKIKKTLTDSDLGILSRLLLAADLVKKQILPMLGGDDARAAETEEGTPVRVWDMDTRSMHHLVLKRWSSSKSYVLIGKWNQDFVRRRDLKKGDEIGFHWDPYNCAFNFCARALRCALLP* 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo10g2522 184 PANTHER TRANSCRIPTION FACTOR B3-DOMAIN FAMILY-RELATED 18 174 - -
Amo10g2522 184 PANTHER TRANSCRIPTION FACTOR B3-DOMAIN FAMILY-RELATED 18 174 - -
Amo10g2522 184 MobiDBLite consensus disorder prediction 24 51 - -
Amo10g2522 184 Gene3D - 65 179 IPR015300 -
Amo10g2522 184 CDD B3_DNA 66 176 IPR003340 GO:0003677
Amo10g2522 184 SUPERFAMILY DNA-binding pseudobarrel domain 64 171 IPR015300 -
Amo10g2522 184 MobiDBLite consensus disorder prediction 1 54 - -
Amo10g2522 184 MobiDBLite consensus disorder prediction 1 23 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo10g2522 Amo-Chr10 87529223 87530322 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo10g2522 48 169 RAV Transcription Factor Family AT1G51120 36.000 1.69e-08 51.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo10g2522 - - pvu:PHAVU_009G204600g 243.432