Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo10g2521 ATGTATGCTCTTTCTTTCTCCACAGGTGATGGAACTTATGCAATGAAAAAGGTTCTTATTCAGAATAGTGAGCAATTGGCATTGGTGAAGGAAGAGATCCGTGTTTCTTCTCTTTTCAGTCATCCGAATCTGCTTCCACTTCTTGACCATGCAGTCATTTCAGTAAAGCCTACTCAAGAGACATCTTGGACCCATGAAGCTTACTTGCTATTTCCTGTTCATTTGGATGGAACATTGTTTGACAATGCTAATACAATGAAAGCCAAGAAGGAGTTCTATTCTACCACAGATGTTCTTCAAATATTTAGTCAGCTTTGTGCAGGACTCAAGCATATGCATGGTTTAGATCCTCCATATGCACATAATGATGTTAAACCAGGCAATGTTCTCATAACACATAGAAAAGGCCAACCTCCACTTGCCATACTGATGGATTTTGGCAGTGCTCGACCTGCCAGGAAGCAAATTCGCTCCCGATCAGAGGCTTTGCAGTTGCAGGAGTGGGCGGCTGAACACTGCTCTGCCCCTTACCGAGCTCCTGAGCTGTGGGATTGCCCAAGCCAAGCTGATATTGACGAGAGGACTGATATTTGGTCACTTGGATGCACACTGTATGCGATTATGTATGGGGTATCTCCATTTGAATATGCACTTGGTGAGTCCGGCGGGAGCCTGCAACTGGCTGTTGTAAATGCTCAGGTGAAATGGCCAGCTGGACCTAAGCCTCCGTATCCAGAGGCGCTGCATCAGTTTGTGACTTGGATGCTTCAGCCTCAGGCCACCGTTCGTCCGCGAATAGATGATATCATTATCCATGTTGACAAGTTGATCTCGAAGTTCTCTCCTTGA 849 0.4558 MYALSFSTGDGTYAMKKVLIQNSEQLALVKEEIRVSSLFSHPNLLPLLDHAVISVKPTQETSWTHEAYLLFPVHLDGTLFDNANTMKAKKEFYSTTDVLQIFSQLCAGLKHMHGLDPPYAHNDVKPGNVLITHRKGQPPLAILMDFGSARPARKQIRSRSEALQLQEWAAEHCSAPYRAPELWDCPSQADIDERTDIWSLGCTLYAIMYGVSPFEYALGESGGSLQLAVVNAQVKWPAGPKPPYPEALHQFVTWMLQPQATVRPRIDDIIIHVDKLISKFSP* 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo10g2521 282 PANTHER SERINE/THREONINE-PROTEIN KINASE 16 7 281 - -
Amo10g2521 282 Pfam Protein kinase domain 11 272 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo10g2521 282 CDD STKc_16 10 278 - -
Amo10g2521 282 ProSitePatterns Serine/Threonine protein kinases active-site signature. 119 131 IPR008271 GO:0004672|GO:0006468
Amo10g2521 282 SMART serkin_6 6 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo10g2521 282 PANTHER - 7 281 - -
Amo10g2521 282 SUPERFAMILY Protein kinase-like (PK-like) 11 272 IPR011009 -
Amo10g2521 282 ProSiteProfiles Protein kinase domain profile. 1 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo10g2521 282 Gene3D Transferase(Phosphotransferase) domain 1 2 281 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo10g2521 Amo-Chr10 87487666 87492303 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo10g2521 7 272 EF-hand Containing Proteins AT4G04710 25.818 1.83e-12 65.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK NAK Amo10g2521 Pkinase 2.3e-28 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo10g2521 K08856 - egr:104421163 525.013