Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo10g2460 ATGATCAAAGGTTGGAGCAAATTCTGGTTGTGTATGAGTTTCCGGAAGTGTTTCCTGATGATATTGATGAGTTTCCACCTAACCGAGAGGTATGTGGGATTGGGAGATTCAGAAGATGACATGCAAGTTTTCTACTATTTTGTTAAGTCAGAAAATGATCCTAAAAATGACCCTCTTTTGCTTTGGTTAACTGGTGGACCTGGCTGTTCTTCAATTTCAGGCTTTGTCTTCCAAATAGGTCCAGTGCAATTTAAAGTTGAGGAATTTGATGGGAGCTTGCCTAAGCTAATCTACAGGGCATCGTCATGGACAAAGGTAGCTAATGTTATCTTTGTAGATTTACCGATGGGAACAGGGTTCTCTTACGCAAAAGATGTCCTTTCTCAACGAAGTGATTGGAAACTTGTTCATCATGCCCACCAATTTATTAGAAAGGGATACATACTAGGAAACCCCGTAACGACAAGTGAAGAAGGAAATGATCATATCCAATATGCTCATGGAATGGCACTTATTTCTGATGAACTCTATTTGTCATTGAAGAGAAATTGTAAAGGAGATTATCTAAATATAAATCCCGAAAATACATTGTGTTTAAGCGACATGGAGTATTACAATAAGTGCCTTGAAAAAATTGATCCCTATTTCATTTTGAATCCATATTGCAACGATGATTGGCTTAAGCAAGACCAAGGGATGCAAACGAGATCTCTGGCTAGAAAGCTTGAGGCCCGTTTCGAAACTCCTCTCATAGTGCCAGATATAGGCTGTGAGAATTTTCTTTTCTTTCTGGTCACTCAATGGGCCAACCACAGGAGCGTACGCAAGGCACTACACATTCGAGAGGGGACTATAGGGGAATGGGTACGTTGTTATAAAGATGATTATGAATTCAGCATCGTTAACAGTGTTCCCTTCCATGCAAATCTCAGTGCAAAAGGGTACCGTTCTTTAATTTTCAGTGGAGATCATGATGCAGTGGTTCCTTTTTTCTCAACTCAAGCATGGATAAGGTCTCTAAACTATTCCATTGTAGATGATTGGAGGCCATGGTATTTAAATGACCAAGTTGCAGGATACACCAGGACTTACTCAAATAAAATGACATTTGCAACTGTAAAGGGTGCAGGACATACAGCTGCTGAATTGAAGCCTAATGAAAGTTATGTCATGTTCACTAGATGGATATCTAATAGGCCTTTGTAA 1206 0.3955 MIKGWSKFWLCMSFRKCFLMILMSFHLTERYVGLGDSEDDMQVFYYFVKSENDPKNDPLLLWLTGGPGCSSISGFVFQIGPVQFKVEEFDGSLPKLIYRASSWTKVANVIFVDLPMGTGFSYAKDVLSQRSDWKLVHHAHQFIRKGYILGNPVTTSEEGNDHIQYAHGMALISDELYLSLKRNCKGDYLNINPENTLCLSDMEYYNKCLEKIDPYFILNPYCNDDWLKQDQGMQTRSLARKLEARFETPLIVPDIGCENFLFFLVTQWANHRSVRKALHIREGTIGEWVRCYKDDYEFSIVNSVPFHANLSAKGYRSLIFSGDHDAVVPFFSTQAWIRSLNYSIVDDWRPWYLNDQVAGYTRTYSNKMTFATVKGAGHTAAELKPNESYVMFTRWISNRPL* 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo10g2460 401 Gene3D - 263 401 - -
Amo10g2460 401 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 23 145 IPR001563 GO:0004185|GO:0006508
Amo10g2460 401 Gene3D alpha/beta hydrolase 23 144 IPR029058 -
Amo10g2460 401 Gene3D alpha/beta hydrolase 145 232 IPR029058 -
Amo10g2460 401 PANTHER PEPTIDASE S10, SERINE CARBOXYPEPTIDASE, ALPHA/BETA HYDROLASE-RELATED 23 145 - -
Amo10g2460 401 Pfam Serine carboxypeptidase 31 144 IPR001563 GO:0004185|GO:0006508
Amo10g2460 401 Pfam Serine carboxypeptidase 145 398 IPR001563 GO:0004185|GO:0006508
Amo10g2460 401 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 145 398 IPR001563 GO:0004185|GO:0006508
Amo10g2460 401 PANTHER PEPTIDASE S10, SERINE CARBOXYPEPTIDASE, ALPHA/BETA HYDROLASE-RELATED 145 398 - -
Amo10g2460 401 PRINTS Carboxypeptidase C serine protease (S10) family signature 112 122 IPR001563 GO:0004185|GO:0006508
Amo10g2460 401 PRINTS Carboxypeptidase C serine protease (S10) family signature 99 111 IPR001563 GO:0004185|GO:0006508
Amo10g2460 401 PRINTS Carboxypeptidase C serine protease (S10) family signature 368 381 IPR001563 GO:0004185|GO:0006508
Amo10g2460 401 SUPERFAMILY alpha/beta-Hydrolases 29 400 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo10g2460 Amo-Chr10 86258339 86269128 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo10g2460 246 401 Calmodulin-binding Proteins AT2G22960 57.325 9.28e-60 190
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo10g2460 K16296 - gmx:100780069 539.265