Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo10g2458 ATGGTAACAATCTTAGGTACTCATACAGTGATCCCAAAAGAAGAAACTCCAAAGGGTCTTCTATGGCTATCAGACAACGACCAACTTTGGCGATGGAGTCATACACCTTCAATCTACGTTTACAACCCAAAACAGAACAACGCCAAGAACAACAACACTGTCGTCGATTCTCTCAGCGAGATTCTCGTTCACTACTATCCATTAGCCGGGAGGCTGAGTTGGACGGACGGTGGCCGTTTGGAACTCGATTGCAACGCAAAGGGGGTATTGCTTCTCGAAGCTGAATCGAAGAAATCAATGGCGGAATATGGAGACTTCACTCCAAATGAACCCAGCATCAAAGAACTCATCCCAGCTGTTGACTACTCTYGTCAAATAAACGAGCTTCCTTTGTTCTTGGCACAGGTGACAAAGTTCCACGGCGGCGATGGCGGCTTTGCAGTCGGAATCCTTTTTTCTCATCCATTAGGCGAYGGCCTWGCCGCCATTCGCTTCATCAACTCATGGGCGAAGCTCACTCGAGGTGCGAAGCTAGATCCAAGCGAGCTTCCGTTTCTCGACCGAACCGTGCTCAAACCAACYGGGCCATTAACTCMACCCCKGTTCGACCACCWGGAGTTCAAGCCTCTGCCGCTCATCCTCGGAAGAACCGACAACATCGAAGAGCAAAAGAAGAAGACGACCTTCGCGCTATTCGAAATTATCAGCGCACATATATGGAGATGCGCTTGCAAAGCTCGTAATCTTGAAGAGAATCAACCAACGGTCGTTAAATTCAACGTCGATATTCGCAACAGATTGAATCCGCCACTTCCTCAAAACTACTTCGGAAACGCGTTGGGTCCGACGGTTACWCCAACTTGCTACGCTAAAGAAATCACCACTCAACCAATCAGTTACGCAKCGCAGAAAATAAGGGAAGCTGTTAATAAAGTGTCGAATCACGAGTTTGTTAAATCMCAAATGCATTACGTGGCAGGGTTTGAAAACCGTTGGGATCTGATTAGRACACMTTATTYGGAGAAAGGTGAGTATAGAGCTGATGTGCCTTTCTTTGGGAATCCTAACATTATACTTGGCAGTTGGATGAGCATGCCGTTTTATGAGGCTGATTTTGGGTTGGGGAAGCCGTTTTATTTTGGTCCTKGTGGTWTGTGTCCTTATGAYAGAGGGRTKATTGCTCTAATGCCTGACGAAGATGGTGATAATGGATATGGTGTTGTGGTGTACATGCACTTTCAGGTAGACCACATGAAAGATTTCATCAAATACTTTTGGGAAGATATTTGA 1290 0.4566 MVTILGTHTVIPKEETPKGLLWLSDNDQLWRWSHTPSIYVYNPKQNNAKNNNTVVDSLSEILVHYYPLAGRLSWTDGGRLELDCNAKGVLLLEAESKKSMAEYGDFTPNEPSIKELIPAVDYSXQINELPLFLAQVTKFHGGDGGFAVGILFSHPLGDGLAAIRFINSWAKLTRGAKLDPSELPFLDRTVLKPTGPLTXPXFDHXEFKPLPLILGRTDNIEEQKKKTTFALFEIISAHIWRCACKARNLEENQPTVVKFNVDIRNRLNPPLPQNYFGNALGPTVTPTCYAKEITTQPISYAXQKIREAVNKVSNHEFVKSQMHYVAGFENRWDLIRTXYXEKGEYRADVPFFGNPNIILGSWMSMPFYEADFGLGKPFYFGPXGXCPYDRGXIALMPDEDGDNGYGVVVYMHFQVDHMKDFIKYFWEDI* 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo10g2458 429 Gene3D - 216 428 IPR023213 -
Amo10g2458 429 Gene3D - 1 209 IPR023213 -
Amo10g2458 429 PANTHER SPERMIDINE HYDROXYCINNAMOYL TRANSFERASE 230 429 - -
Amo10g2458 429 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 230 429 - -
Amo10g2458 429 PANTHER SPERMIDINE HYDROXYCINNAMOYL TRANSFERASE 5 231 - -
Amo10g2458 429 Pfam Transferase family 1 227 - -
Amo10g2458 429 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 5 231 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo10g2458 Amo-Chr10 86232243 86233676 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo10g2458 2 427 Monolignol Biosynthesis Gene Families AT5G48930 32.892 3.59e-75 239
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo10g2458 K13065 - gmx:100779814 456.832