Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo10g2370 ATGTCGGACACCGAAGGCATAGACCAATACGGCGTGCTCCTCTACTACAAGTATGCCCACATCCCCAACCTCGACGACCTCCTCTCCTTCTATCACTCCAACTGCTCCCAACTCTCCCTCCTCGGCCGCGTTCGCCTCTCTTCCCGCGGCGTCAATGTTACTGTTGGTGGGAAATTGTCGTGCTTGGAGAGCCACATTGAAGCCCTCAAGGCCAAGGACTGTGTGTTCGAAGGGACCGATTTCAAGCTTGCTACTTGTGACGAGCCGCTAAACGATAGGGTCGCCGAGGAGTGTGGATTCACTTCTCTRTCCATTCGAATCGTCGAGGAACTAGTTACTCTCAGTTCTCATCCCTTGTTAAAGTCACCGGAGATTTCAAATGCTGGAAGACATCTTTCAGCATCTGAGTTTCATTCTTCCCTTCAAAATGCTGATCAGAAGAGTCAAGGAAACGGCCTTGTGTTACTTGATGCAAGGAATCTGTATGAAACAAGAATCGGGAAATTCCATGCACCAAATGTCGAAACTTTGGATCCACAAGTTAGGCAGTATAGTGATTTATCCTCGTGGATAGATGATAATAGTGAGCAGCTGAAAGGAAAACATGTCCTTATGTATTGTACTGGAGGAATCAGGTGTGAAATGGCATCTGCGTATATTAAGTCAAAAGGTGCTGGCTTTGAGAATGTGTTTCAGTTGTTTGGTGGTATCCAACGGTATTTGGAGCAATTCCCAGATGGTGGTTTTTTCAAGGGGAAAAATTTTGTGTTTGATCACCGGATTTCTGTAGGAAGTTCAGATACTAATGTTCTTGGTACATGCCTTATCTGTCATCGTTCATTTGATGATTATTCTTCACGCTGCCGATGTACTTATTGTAGAATGCTTGTCTTAGTTTGTCATAATTGTCAGAATGAAGCTGCATTGTATGTTTGTGAGTTGTGCCAGAAGCAGGGCAAATCTATTCAGTCAATGCAGTTAATTGATACTGGTGAATTGAAAACCCCATTGGAAGGTGCTGAGTTGCAAAATTCATCTTCAAATGCTACATTATCACCTCAAATGCCTAAGGGAGATGATGTCAGGTCCTCTAGAAAGCTTAGAATCTTATGCTTGCACGGGTTTCGGCAGAACGCTTCCAGTTTTAAGGGAAGAACATCGTCATTAGCAAAAAGACTAAAGAAAATTGCCGAATTTGTTTTCGTTGATGCACCTCATGAGTTGTCATTCATTTATCAAACAACTTTAGCCAAAGATGCGACTTGTGAATCATCTCCAATGCTGTCTAGTCCACCTCCACCTTTGGAGAATTGCAAGAAGAAATTTGCATGGTTAGTAGCTCCCAATTCCGATGGAAGTACTGATGTCAATTGGAAGATAGCAGAAGGCCCATTCGATCCACTTCAATACCAGCAACAAACTGAAGGATATGATACTTCCTTGTCACACTTGAAGAACGTTTTTTCCCAACAAGGGTCTTTTGACGGTATCTTGGGATTTTCACAGGGAGCTGCGATGGCGGCTTTAATCTCTGCGCAACAAGAACAACTAAAAGGTGAAATGGACTTCAAATTTGTAATAATATGCTCAGGCTTTGCTCTCAATGTAAAGGAGATGGAACGCGGCATCATCAAGTGCCCTTCTCTTCATATTTTCGGCAATGAACATGGTAAGGACAGGCAGATAGCCAACCAAGCAAGCAAGGAACTTGCTTCATTGTATGACGATGGTTGTTCTGTGATAATTGAACATGATTGTGGTCACATAATTCCTACTCGATCGCCATATATTGATGAGATAAAGGGTTTCCTTGGGCGTTTTCTGTAA 1827 0.4308 MSDTEGIDQYGVLLYYKYAHIPNLDDLLSFYHSNCSQLSLLGRVRLSSRGVNVTVGGKLSCLESHIEALKAKDCVFEGTDFKLATCDEPLNDRVAEECGFTSLSIRIVEELVTLSSHPLLKSPEISNAGRHLSASEFHSSLQNADQKSQGNGLVLLDARNLYETRIGKFHAPNVETLDPQVRQYSDLSSWIDDNSEQLKGKHVLMYCTGGIRCEMASAYIKSKGAGFENVFQLFGGIQRYLEQFPDGGFFKGKNFVFDHRISVGSSDTNVLGTCLICHRSFDDYSSRCRCTYCRMLVLVCHNCQNEAALYVCELCQKQGKSIQSMQLIDTGELKTPLEGAELQNSSSNATLSPQMPKGDDVRSSRKLRILCLHGFRQNASSFKGRTSSLAKRLKKIAEFVFVDAPHELSFIYQTTLAKDATCESSPMLSSPPPPLENCKKKFAWLVAPNSDGSTDVNWKIAEGPFDPLQYQQQTEGYDTSLSHLKNVFSQQGSFDGILGFSQGAAMAALISAQQEQLKGEMDFKFVIICSGFALNVKEMERGIIKCPSLHIFGNEHGKDRQIANQASKELASLYDDGCSVIIEHDCGHIIPTRSPYIDEIKGFLGRFL* 609
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo10g2370 608 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 123 263 IPR036873 -
Amo10g2370 608 SUPERFAMILY alpha/beta-Hydrolases 358 608 IPR029058 -
Amo10g2370 608 Gene3D - 121 278 IPR036873 -
Amo10g2370 608 Pfam UPF0176 acylphosphatase like domain 11 110 IPR040503 -
Amo10g2370 608 SUPERFAMILY FYVE/PHD zinc finger 271 319 IPR011011 -
Amo10g2370 608 ProSiteProfiles Rhodanese domain profile. 149 249 IPR001763 -
Amo10g2370 608 SMART rhod_4 139 246 IPR001763 -
Amo10g2370 608 Gene3D - 2 112 - -
Amo10g2370 608 Pfam Rhodanase C-terminal 251 316 IPR022111 -
Amo10g2370 608 PANTHER THIOSULFATE SULFURTRANSFERASE/RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 2 8 607 - -
Amo10g2370 608 PANTHER THIOSULFATE SULFURTRANSFERASE/RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 2 8 607 IPR020936 -
Amo10g2370 608 Pfam Serine hydrolase (FSH1) 365 599 IPR005645 -
Amo10g2370 608 Gene3D alpha/beta hydrolase 363 608 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo10g2370 Amo-Chr10 82745234 82750548 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo10g2370 5 608 Sulfurtransferasese or Rhodanese AT1G09280 64.851 0.0 796
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo10g2370 - - gmx:100786152 988.408