Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo10g2356 ATGATAGATCGGTGGCAAAAGCTAGTGGAACACAAAAGATCTTGTGAGATTGATGCAAGTTCAGAATTCGATGTTCTCACGGGCGATGTTATTGCTCGAGCAGCTTTTGGAAGCAACTACCAAGAGGGAAAGAAAATCTTTGACCTACAACATGAGATTAGATTCCTAGTCAATGAAGCTGCCAACGCCATTTATATCCCAGGTTTCAGATTTATACCAACACAGAAGAACAAGAGAAGGTACGATCTGGATGTTGAAATCAAATCTATATTGATGGATATGATTGAGAAGAAAGGGCATGCAATTAAGGACGGTAAAATAGAAGGCAGTGATTTGTTAAGTCTTCTACTAGAATTTAAACAACACAATAATTCTCTCACAAATGAGGATATAATCGAAGAGTGCAAGTTGTTCTACTTTGCTGGCCACGTCACCACATCCAAYCTACTTGCGTGGACTATGGTGTGTTTGTCTATGGATCCTTTCTGGCAAGAAAAGGCAAGAGATGAGGTACTTCATTTGTTTGGTAAAAGAGCCCAACTTGATTTTGAAGACATAAATCGCCTCAAGATTGTGGCAATGATATTGAAGGAAGTTTTGAGACTGTATCCACCTCTACCAGTTTTATACAGATACACTAAGTGTGAAACGAAAATAGGGAACATGACTATTCCAGCAGGTGTTGAACTTGTTTTACAAGTGTTGCATATTCATCATGATAACAAATATTGGGAGAAGGCAGAAGAGTTTAATCCAGCAAGGTTTGCTGATGGGATTTCAAATGCTTCTAAYGAAGATCATGCTGCTTTTTATCCATTTGGATGGGGTCCAAGAATCTGTGTTGGACAAAACTTTGCATACTTGCAAGCAAAGATGGCACTCTCTAAGATTCTTCAAAATTTYTCGTTCCACCTYTCACCCTCTTATTCACATGCTCCATCTAACTATCTTACTCTCAAGCCAATACATGGAGCTCCCGTTATTATTCATCGCATTTCAGACTCTTAA 1008 0.3869 MIDRWQKLVEHKRSCEIDASSEFDVLTGDVIARAAFGSNYQEGKKIFDLQHEIRFLVNEAANAIYIPGFRFIPTQKNKRRYDLDVEIKSILMDMIEKKGHAIKDGKIEGSDLLSLLLEFKQHNNSLTNEDIIEECKLFYFAGHVTTSNLLAWTMVCLSMDPFWQEKARDEVLHLFGKRAQLDFEDINRLKIVAMILKEVLRLYPPLPVLYRYTKCETKIGNMTIPAGVELVLQVLHIHHDNKYWEKAEEFNPARFADGISNASNEDHAAFYPFGWGPRICVGQNFAYLQAKMALSKILQNFSFHLSPSYSHAPSNYLTLKPIHGAPVIIHRISDS* 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo10g2356 335 PANTHER CYTOCHROME P450 FAMILY MEMBER 1 330 - -
Amo10g2356 335 PRINTS E-class P450 group I signature 26 44 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo10g2356 335 PRINTS E-class P450 group I signature 130 147 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo10g2356 335 PRINTS E-class P450 group I signature 150 176 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo10g2356 335 PRINTS E-class P450 group I signature 193 211 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo10g2356 335 PRINTS E-class P450 group I signature 233 257 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo10g2356 335 PRINTS E-class P450 group I signature 270 280 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo10g2356 335 PRINTS E-class P450 group I signature 280 303 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo10g2356 335 PANTHER CYTOCHROME P450 72A15-LIKE 1 330 - -
Amo10g2356 335 SUPERFAMILY Cytochrome P450 2 330 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo10g2356 335 PRINTS P450 superfamily signature 141 158 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo10g2356 335 PRINTS P450 superfamily signature 194 205 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo10g2356 335 PRINTS P450 superfamily signature 271 280 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo10g2356 335 PRINTS P450 superfamily signature 280 291 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo10g2356 335 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 273 282 IPR017972 GO:0005506|GO:0016705
Amo10g2356 335 Pfam Cytochrome P450 1 311 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo10g2356 335 Gene3D Cytochrome P450 1 334 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo10g2356 Amo-Chr10 82098029 82099790 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo10g2356 1 332 Cytochrome P450 AT3G14620 49.851 4.86e-111 331
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo10g2356 - - aip:107623710 445.662