Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo10g2352 ATGGCTGCAGGTTCCACTGCTGGTTCTCACTCCCGGAAAGGGCTCGGATTCATGCGCTATGATGACTCAGATGAGGAAAATACAGACTACAATCAGCAACAGTGGCAGCACAATGTTGAAGCTTTCTCTTTAGCTGGAAGTGTTGCTAGTAAGGATTCTGAAGTAGAAATTGGTTTCTTAAGAAATACAGAGAAACACATAGAAAGAAAAGAAAAGAAAGGACTAATAAGCAATGATCAAGAAGATGAAGATTACATTTTGGCTGAAGCMAGGCAACCATTGTGGCGAAAAGTGCCGGTACCTTCAAGCCTAATCAATCCATACCGGATAGTCATTGTCATGCGCCTCGTCGTGCTGGCATTCTTTTTTCGCTTCCGGATCCTAAATCCAGTCCATGATGCATTTCCACTCTGGTTGGTCTCAGTAATTTGTGAAATATGGCTAGCATTGTCCTGGCTAGTTGATCAGCTACCAAAATGGTTCCCCATCACACGCRAAACCAGCCTCGAGCGCTTGTCCTTGCGCTTCGAGCAAGAAGGCAGGCAAAACAAACTATCCCCTGTTGATGTTTTTGTGACAACTGCAGACCCTTTTAAAGAACCACCAATCATAACAGCAAACACTGTCTTATCAGTACTTTCTGTTGATTATCCAGTAGAAAAGGTTAACTGCTATGTCTCGGATKACAGTGCTTCAATGCTTCTCTATGATACTTTGTATGAAACTTCAGAGTTTGCAAGAATTTGGATCCCTTTTGTGAATAAGTACAGCATTGAGCCAAGAGCACCTGAATTCTATTTCTCTCAGAAGGTTGATTACTTGAAAGACAAGGTTCATCCTACATTTGTAAGGGACCGCAGGGCGATGAAGAGAGAGTATGAAGAGTTTAAGGTGAGAATCAATGTGTTGATTTCAAAGGCTCAGAAGAAACCAGAAGAGGGTTGGGTGATGAAAGATGGAACACCTTGGCCTGGGAACAACACTGAAGATCATCCAGGGATGATTCAGGTGTGTTTGGGAAGTGCTGGTACACTGGACATGGATGGCAAACAACTGCCACGGCTTGTGTATGTTTCGAGGGAGAAGCGCCCCGGCTATCGACACCACGAGAAAGCTGGTGCTATGAATGCTTTGGTTCGAGTTTCTGCTGTTCTTAGCAATGCTCCTTTTGTGTTGAACTTGGATTGTGACCAGTATATCAATAATAGCAAGACTATAAGGGAGGCTATGTGCTTCTTAATGGATCCTCAGCTTGGAAAGAGGATTTGTTTTATCGTGATGAAAGGACTTGATGGGATTCAAGGCCCAGTGTATGTTGGCACTGGTTGTGTTTTCAATAGGCAGGCAATATATGGCAATAWACCGCCATCTGATAAAAAGCCKAAGACAAGCCAGTCTTCATGCTGCTGCTGCTGCTGTTCTGGTGATGATTCTGGGTCCACRTTTGATCTTGAAGAGATTGATGAAGGACTTGAAGGGTTTGAAGAGAAAGAGGAAACATCYTTCATTTCAATGAAAAACTTTGAGAAGCAATATGGAATGTCACCAGTTTTGATTGCTTCTGTTTTGATGGAAGATGGTGGACTTCCAAAAGTGACCAATACACAGTTGCTGATTAAGGAAGCAATTCATGTTATTAGCTGTGGTTATGAAGAGAAAACTGAATGGGGCAAAGAGATTGGGTGGCTTTATGGCTCAGTGACAGAAGATATCTTAACAGGATTTAACATGCATTGTAGAGGGTGGAAATCAGTGTACTGCATGCCAAAGAGAGAYGCTTTTAAAGGATCTGCTCCTATAAATCTATCTGATAGATTACACCAAGTTCTGAAATGGGCTCTTGGTTCAACTGAGATTTTCTTTAGTGGCTATTGCCCATTGTGGTATGGTTATACTGGTAAACTAAAATTGCTACAGAGGTTGGCTTACACTAATACTATTGTTTATCCTTTCACTTCCATCCCTCTCTTGGTGTACTGCACGATTCCRGCCGTCTGTCTTCTGACTGGAAAATTCATYGTYCCMGCGTTAACAAATGTTGCTAGCATTTGGCTAATGGCTCTGTTCACCTCCATGATCTTAACGTGCGTGCTAGAGCTCCGGTGGAGTGGGGTAAACATTCAGGACTGGTGGCGCAACGAGCAATTCTGGGTGATCGGCAGCGTCTCCTCGCACCTCTTTGCCGTGTTCCAAGGTCTCCTCAAAGTTGGTGGAGTACACTCTAACTTCACAATCAGAGCAAAATCCACAGATAACAACAGTGTATCCAATCAACTCTATCTCTTCAAATGGACAACTCTTATGATACCACCAASAAGTCTTGTTATCTTGAACATGGTTGGGATTGTGGCCGGAATATCTGATGCCATTAACAATGGATATAACTCATGGGGACCTTTGTTTGGGAAGCTTTTCTTTTCTTTTTGGGTCATTATTCATCTATATCCTTTCCTTAAAGGTCTAATGGGAAGGCAGAACAGAACACCTACCATTGTTGTCCTCTGGTCAATACTTTTAGCATTGGTTTTCTCAATGATTTGGGTGAGAATTGATGTGTTCTTGCCCAAGAAAACAGGTCCAGTTCTAGTACAATGTGGGTTAGAATGCTAA 2610 0.4245 MAAGSTAGSHSRKGLGFMRYDDSDEENTDYNQQQWQHNVEAFSLAGSVASKDSEVEIGFLRNTEKHIERKEKKGLISNDQEDEDYILAEARQPLWRKVPVPSSLINPYRIVIVMRLVVLAFFFRFRILNPVHDAFPLWLVSVICEIWLALSWLVDQLPKWFPITRXTSLERLSLRFEQEGRQNKLSPVDVFVTTADPFKEPPIITANTVLSVLSVDYPVEKVNCYVSDXSASMLLYDTLYETSEFARIWIPFVNKYSIEPRAPEFYFSQKVDYLKDKVHPTFVRDRRAMKREYEEFKVRINVLISKAQKKPEEGWVMKDGTPWPGNNTEDHPGMIQVCLGSAGTLDMDGKQLPRLVYVSREKRPGYRHHEKAGAMNALVRVSAVLSNAPFVLNLDCDQYINNSKTIREAMCFLMDPQLGKRICFIVMKGLDGIQGPVYVGTGCVFNRQAIYGNXPPSDKKPKTSQSSCCCCCCSGDDSGSTFDLEEIDEGLEGFEEKEETSFISMKNFEKQYGMSPVLIASVLMEDGGLPKVTNTQLLIKEAIHVISCGYEEKTEWGKEIGWLYGSVTEDILTGFNMHCRGWKSVYCMPKRDAFKGSAPINLSDRLHQVLKWALGSTEIFFSGYCPLWYGYTGKLKLLQRLAYTNTIVYPFTSIPLLVYCTIPAVCLLTGKFIVPALTNVASIWLMALFTSMILTCVLELRWSGVNIQDWWRNEQFWVIGSVSSHLFAVFQGLLKVGGVHSNFTIRAKSTDNNSVSNQLYLFKWTTLMIPPXSLVILNMVGIVAGISDAINNGYNSWGPLFGKLFFSFWVIIHLYPFLKGLMGRQNRTPTIVVLWSILLALVFSMIWVRIDVFLPKKTGPVLVQCGLEC* 870
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo10g2352 869 MobiDBLite consensus disorder prediction 1 32 - -
Amo10g2352 869 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 7 425 - -
Amo10g2352 869 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 425 869 - -
Amo10g2352 869 SUPERFAMILY Nucleotide-diphospho-sugar transferases 350 674 IPR029044 -
Amo10g2352 869 Pfam Cellulose synthase 188 425 IPR005150 GO:0016020|GO:0016760|GO:0030244
Amo10g2352 869 Pfam Cellulose synthase 426 861 IPR005150 GO:0016020|GO:0016760|GO:0030244
Amo10g2352 869 PANTHER CELLULOSE SYNTHASE-LIKE PROTEIN 7 425 - -
Amo10g2352 869 PANTHER CELLULOSE SYNTHASE-LIKE PROTEIN 425 869 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo10g2352 Amo-Chr10 81949887 81954867 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo10g2352 79 869 Cell Wall Biosynthesis AT5G17420 65.371 0.0 1141
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo10g2352 K10999 - gmx:100777278 1375.15