Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo10g2349 ATGTGTTGTTTGAGATCATTCAGGTGCAGTTTTTGCTGCATCTTCCTCACACTCTTCACCTTATTCTTGTGCTGCATTCTATCCATATTCCTATTTTGGATTATCATATCCCCATCAAGTGTCAAATTCCAAGTAACCAATGCTTCCCTCACTCAATTCAATCTCAGCAACAACACCACCACATTGAACTACAAATTCAAAGTCAACATAACTGCAAGAAACCCTAAGAACAACGTGGTGGTGTACTATAGGAGGATCACCGCATATGTGTGGTACAAAGACAGGTATTTTGCTACCATAAACTTGGTGCCATTTGATCAAGGCCACAAGAACACCACCCTCCTTCAAGAACCCGTCCCAAAGCAAATTGCTGAGTACAACATGGAAAGGAGTGTGGAAATTTTCAATGACTTGGCTGTCAATTTGGATGTTACGATAAGGGCTAAGTTTGGGAGGTTCAAGAGCAGTCGGTTCGATCCGCAGTTTTTAAGTGTCGCCGGCTCAGGGTTCCTTCGATTTCGAATGGTAAACCGGCGGCAACATTTAATGTTAGAAGGTGCAGTAGTCCTTATTTCTTTTAGGATTGGGATGATGAGGGATAGCCTCGTATTAAATATAAATTTTGACCTTTTGAGTATTTGA 642 0.4143 MCCLRSFRCSFCCIFLTLFTLFLCCILSIFLFWIIISPSSVKFQVTNASLTQFNLSNNTTTLNYKFKVNITARNPKNNVVVYYRRITAYVWYKDRYFATINLVPFDQGHKNTTLLQEPVPKQIAEYNMERSVEIFNDLAVNLDVTIRAKFGRFKSSRFDPQFLSVAGSGFLRFRMVNRRQHLMLEGAVVLISFRIGMMRDSLVLNINFDLLSI* 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo10g2349 213 Pfam Late embryogenesis abundant protein 69 150 IPR004864 -
Amo10g2349 213 PANTHER HARPIN-INDUCED 1 20 161 - -
Amo10g2349 213 PANTHER OS05G0367900 PROTEIN 20 161 IPR044839 GO:0098542
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo10g2349 Amo-Chr10 81922928 81923601 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo10g2349 35 116 SNARE and Associated Proteins AT1G32270 35.366 5.22e-10 56.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo10g2349 - - ahf:112749063 196.823