Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo10g2347 ATGTCCGCGCTCCTTCTGTCTCTCCTCACCCGTCGCGTTGCCATCTCCCTCTCTGAAGCCGTCGCGCCGCCGTCTCCCTCTCCCTCACTTGTCGCACCTCCGTCAACCACCTTCAGCATTCGCAGCGCTGTGAGAATACCTCCAGATTTTTTGCAAGGTGACAAATTTAGAGCACCAGCAGATAATTACATTAGGCCTCTCCTAACTAAGGGTGAAAAAAGAAACCCCTTTAACTCTTATGTGGACTTTCAATATGACATACAAGGCCAATATGAAGTTGCTCTTTCCAAAATTGATGAGGCCATAGAACACATTCCTACTGTTATTGATCTATATTCTGTCAAGCGAGAGTTGCTCATGGGAATATATGAGAAGGGTTTTGAAAGGCCTTCTCCTATCCAAGAAGAAAGCATTCCAATTGCTCTTACTGGTAGTGACATTCTTGCAAGGGCTAAAAATGGGACAGGCAAAACAGGATAA 480 0.4562 MSALLLSLLTRRVAISLSEAVAPPSPSPSLVAPPSTTFSIRSAVRIPPDFLQGDKFRAPADNYIRPLLTKGEKRNPFNSYVDFQYDIQGQYEVALSKIDEAIEHIPTVIDLYSVKRELLMGIYEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTG* 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo10g2347 159 PANTHER ATP-DEPENDENT RNA HELICASE DEAD-BOX, CONSERVED SITE-RELATED 110 158 - -
Amo10g2347 159 Gene3D - 36 118 - -
Amo10g2347 159 PANTHER DEAD-BOX ATP-DEPENDENT RNA HELICASE 50 110 158 - -
Amo10g2347 159 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 113 158 IPR027417 -
Amo10g2347 159 Gene3D - 119 159 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo10g2347 Amo-Chr10 81891523 81894681 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo10g2347 100 158 Eukaryotic Initiation Factors Gene Family AT3G19760 44.068 4.67e-10 55.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo10g2347 K12614 - adu:107472342 95.1301