Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo10g2346 ATGGGAACTAATCATGTTATGGATGAGGCTGATAAGCTTTTGTCCCCAAAATTCCAACATTCTATAGTTATTAATTTTGATTTTCCCAAGAATTCAGAAACTTATCTCCATAGGGCCAGTCGCTTAGGGAGCTTTGGGCATCTTGGTTTAGCAGTTAACTTGATCACTTATTGGGACCACTTTAATTTGTATATTGAACAAGAATTTGGAATTGAAATAAAGAAAATTCCACCACACATTGACCAGTTTGGGGGGAATGAGAAGAGTTTTCAATTTCCCTCAGGGACAGAGAGAACAGTTGGCCTGCACTTGGACGTCTCACACCCTAATTTACTTCCGAAAGAGATTATTCGTGAAGTGTATTGTGGAGCTTTCCATTTGGTTCCTTTATCCGAGGAAGGCCTAGTACAAGCTTGGGAGATGACAGGGCTAATTTGGTTTGAATTCTATTGA 453 0.3951 MGTNHVMDEADKLLSPKFQHSIVINFDFPKNSETYLHRASRLGSFGHLGLAVNLITYWDHFNLYIEQEFGIEIKKIPPHIDQFGGNEKSFQFPSGTERTVGLHLDVSHPNLLPKEIIREVYCGAFHLVPLSEEGLVQAWEMTGLIWFEFY* 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo10g2346 150 PANTHER DEAD-BOX ATP-DEPENDENT RNA HELICASE 12 22 82 - -
Amo10g2346 150 PANTHER DEAD-BOX ATP-DEPENDENT RNA HELICASE 50 22 82 - -
Amo10g2346 150 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 21 79 IPR027417 -
Amo10g2346 150 Gene3D - 17 90 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo10g2346 Amo-Chr10 81889212 81891274 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo10g2346 21 81 Eukaryotic Initiation Factors Gene Family AT5G11170 38.095 1.28e-10 56.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo10g2346 K12614 - adu:107483871 165.622