Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo10g2301 ATGTTGTTGTGGCCTTGTCCATCATCAGCAGAGAAGACAGTGATTAATGTTGGAGTAGTGCTTGATCTTAGTGAAACAGTGGGGAAGATTGGATTGAGTTGCATCAACATGTCCCTTTCGGATTTCTATGATGCTCATCCTCATTACAACACCAGGATGCTCCTCCATGTCAGAGACTCTCAAACTGATGTGGTTACCGCTGCTTCTGCAGCTGTAGAGTTGATGAAAAAGGAGAAAGTGGAAGCAATAATGGGACCAGTAACATCAATGCAAGCAAGCTTTGTTTTGAATCTTGGAGACAAAGCTCACGTTCCAATCATATCCTTCACCGCAACAAGCCCTTCTTTAACTTCGCTTGGCAGTTCCTACTTCTTTAGAATTGCACAAAATGATTCTACTCAAGTACACGCCATAAGCGACATCATCCAATCCTTCGGCTGGAGACAAGCAGTTCCTATCTACATCGACAACGACTATGGCCGCGCCATTATTCCCTTCTTAACCAATTCCCTTCAACAAGCAAATATCAGGGTCCCATACCTCGCTGTTATTCCTCCCTCCGCCACCGCCGATCACATTGAAGAAGAGCTTTACAAGCTTATGACCATGGAAACTAGGGTTTTTGTTGTTCATATGGTGGGGAATCCTGGGTCCACTCTCTTTGCCATTGCGGATCGGATTGGAATGATGAAACAAGGCTATGTTTGGATTGTAACCAATGGTATGGCTAATACTTTGGCCTCTCTTGACGCCTCGGATATTCAAGCGATGCAAGGTGTGTTAGGAGTGAAAACATATGTTCCCAAAACCAAAAGGGTTGTTGATTTCCAAGCACGTTGGAAGAGGCGTTTCTTGCAGGACAATCCAGCCATGGTTGATGCAAGCATCAATGTGTTTGGATTATGGGCTTATGATGCCTCAACCGCGCTCGCAAGCGCGGTTGAGAGGGCTAATAATAATAATTCAAAACCCGGATTTCGAAACACCACAAATAATGCTTCCAGAAATTTCAGTGAGATTGACAATATAGGAGTGTCTCAGAGGGGTGAAGAATTGCGGGATGCTTTATCGGACACCAGATTCAGCGGCCTGGCCGGCCAATTCGGCCTTGTCAATGGAGAATTAGAAGCTGCAACTTTTCAGATAATTAACGTAAATGGTAATGGAGAAAAGGTGATAGGATTTTGGACACCACAGAAGAGATTAACAAGAAATCTTAGCAGCCTAATAAAAAGTAGTACAACTGATTTGAATAATAATCATGATAATGTTCTAGGAGCAATGATATGGCCAGGGGATAGTTATTCAGTTCCAAAGGGGTGGGAGATACCAACCAATGGGAAGAAACTGAGGATTGGAGTCCCGGTGTCATCAAGGCCTCAATTTGTGAAGGTGGAAAATGATGGTGAAACTAACACAACCAAGGTAACTGGTTTTAGCATTGATGTGTTTGAAGCGGTGGTGCAAGCTTTGCCTTATGCTTTGCCATACCAATTCATTCCTTTTGCAAAACCCAATGGGGAGAGCGCCGGCACCTATGATGATTTAATCATGCAGGTCTATTTTGGGGTGTTTGATGCTGTGGTGGCAGACACAACGATTATAGCAAACAGGTCAAAGTACGTTGACTTCACGTTGCCGTATACAGAGTCAGGAGTATCAATGGTGGTGCCAGTGAAAGATAAGAGCAAGAAGGGTGCATGGGTGTTCCTAAAGCCTCTCACCTGGGATCTATGGATGACCACTGGTTGTTCCTTCGTGTTCTTTGGATTCGTAGTGTGGGTTCTTGAGCACCGCATCAACAAAGATTTTCGTGGCCCTCCTTCTCACCAGATCGGCACCAGTTTGTGGTTTTCTTTCTCCACCATGGTCTTTGCTCATCGAGAAAAAGTAGTGAGCAACACTGCACGGTTTGTTGTGATAATATGGGTATTTGTGGTGCTGATTTTGACTCAGAGTTACACAGCAAATTTGTCATCACTACTAACGGTGGAGCAACTTCGACCAACCGTGACCAATGTAAATGATCTAATAAAGTATAGAACACGTGTTGGGTACCATACAGGTTCTTTTGTTCGTGGGATCTTGCTCAACCTTGGTTTCAAGGATTTTCAGCTCATAACTTATAATTCCACAGCACAATGTGATGATCTTCTCAGCAGAGGCAGTCAAAACGGTGGAATTGCTGCTGCATTTGATGAAATTCCATACATTAGGATTCTTCTTGGAACCTATTGCTCTAAGTATACCATGGTGGACCCCACATTTAAAACCGATGGCTTTGGCTTTGTATTCCCAAAAAGTTCTCCTCTGGTGGGTGATGTATCAAGGGCAATTCTGAAAGTAACTGAAGATCCAAGAATGAAAGAAATAGAGAGTGCATGGTTTGAGAAGCGAAGTAGTTGCCAGCAAGAAGATGCATCAGTGTCTTCTTCTAATAGTCTTGGCCTAGACAGCTTCTGGGGCCTATTTCTCATTGCTGCATTGGCTTCCATTTCAGCACTCCTCATCTTTGCAGTTACATTCTTGTATGATCATAGACATCAATGGTGGTTCATCAATAATGATTATTCAACATGGAAGACTCGAATCCGCATCTTGCTGAGAATCTTCGACCAGAGAGACCCTAGGTCTCAAAGATTCAGGAGCGGTGGTACTGATTCAAATCCAGCTTCTCCTTTCAAGGATCACCTTGTGAAGACAGCAATAAACAACGTTAGAAAATTGTTGGGTTTTGTTTACTCTATGAACTTGGTTGTGTTGTTGGGTGTGGCGGCAGTGGCAGAAAGAGAAGTGAAAGTGGGAGCGGTGCTTGATGTTGGGGTTGGAATGGTTGGGAAAATGGGTTTAAACAGCATCAGAATGTGCATCCATGATTTCTATGTCTCTAATCCTCATTTCAAAACCAGGCTCCAACTTATTCTTAGGGATTCCCAAAGGAACGTTGTTACTGCTGCTGCTCAAGCTTTAGATCTCATAAAGAATGAGCAAGTGGAAGCTGTGATAGGACCAGTTACAACAACGGAAGCCATGTTTGTGATCAACCTCGGAGACAAAGCGCACGTGCCCATTGTCACGTTCTCAGCAACGAGCCCTTCTCTCTCATCACTCCACACCCCATATTTCTTTCAAATTGCTCAGAAAGATTCAACTCAGGTGGAAGCCATAACCGCCATTATCCAAGCTTTTCGGTGGAAAGAAGTGGTTCCAATTTATGTAAACAACAGTTATGGCGAAGGACTCATTCCATGGTTAACTAATTCACTTCAAAAAGCATACATCCGTGTTCCTTATCTGTCTGCCATTGATTTCTCAGCCACAGATGATGCCATTGAAAGAGAGCTCTACAAGCTCATGACTATGCAAACTAGAGTCTTTGTCGTTCACATGACACCCCTTCTTGGCTCTCGTCTCTTTGCCATTGCCAAAGCCATTGGCATGATGGATCAAGGTTATGTTTGGATTGTCACTGATGGAATGGCTAATTTCTTCAACTCGTTGGACTCTTCAGTTATGGACTCCATGGAAGGTGTCTTGGGTGTCAGGCCTTATATTCCAAGAACTAAACAGTTTCTTGATTTTAGAGCTCGATGGAAACGACAGTTCCTAAGAGACAATCCAACACTTGTTGATATCAATCTGAATGCTTTTGGAATATGGGCCTATGATGCTACCACCGCATTGGCCATGGCCGTTGAGAAACTTGACAGCACCCTTTCTGGCTTCACTAATGTGAGCAAGAACTCAAGCAATGTGACTGATCTTGAAAACTTTGGCGTTTCGCGAAACGGTGAGAAGCTGAGAGAAGCTTTGTCAAATGTTAGATTCAAAGGTGTTGGTGGTGACTTCAAATTAGTTGGTGGTGGGGAGTTAGAAGCATCAGCATTTGAGATAGTTAATGTGATTGGTAATGGTGAAAAAAACATTGGATTTTGGATGCCAGAAAAGGGACTAATTAGAAGTATGGATGCCAAAACTGCAACAACCGCATATTCAAGTTCTAAAGAGAATCTAGGAAGAATTATATGGCCAGGGGACTCTTACTCTATTCCAAAGGGATGGCAGATTCCCACAAATGGTAAAAAGTTAATGATAGGGGTTCCAGTAAAAGATAGTGGCTACTCTGAATTTGTGAGAATAATCCATGACCCTATTACTAATTCTACAAAGGTCACTGGGTTCTGCATTGATGTCTTCAATGCTGTGGTAGAAGCCTTGCCTTATGCCCTTTCATTTGACTTGATTCCATTTGAAAACTCCAACGGTGAGATGGCAGGAACTTATGATGATTTGGTCAACCAAGTTTATTATGGGAAGTCTGATGGTGTGGTGGGAGATACAACAATTACGGCAAACAGGTCCAATTATGTTGATTTCACATTGCCGTACACAGAATCTGGTGTGACTATGGTTGTTCCAATAAAAGACAACAGAAAGAAGAATGCATGGGCCTTCTTGAAGCCATTGACATGGGACCTTTGGGTTACAACATTTTGTTCATTTGTATTCATAGGATTCGTTGTTTGGGTTCTTGAACACCGAATTAACAACCATTTCAGAGGGCCTCCTTCTTATCAGATTGGCACTAGCCTGTGGTTTTCCTTCTCAACCATGGTGTTTTCCCATCGGGAGAGGGTAGCAAGCAACTGTGGAAGATTCGTGGTGATAGTATGGGTTTTTGTGGTTCAAATTCTAGTTCAAAGCTACACTGCAAGTCTTACCTCTCTCTTAACAGTTGAACAATTACGCCCAGTTATTACCGATGTGCATCAACTCCTAAAGAATCGGTTGAATGTTGGTTATTTGGATGGTTCTTTTGTTCGTGAAATCTTGAAGGATTTGGGATTCCAAGAAAGCCAGCTCAAGATTTACAGATCTGCAGAAGAATGCAATGATCTCTTCACAAAAGGAACTGCAAATGGTGGCATTGATGCTGCGTTTGATGAAGTTCCATATGTGACACACCTTCTTCAAATTTACTGCTCTAAGTATACCATGATTGAGCCAAGATTTAAAACTGGTGGCTTTGGATTTGTGTTTCCGAAAGGGTCACCTCTTGTAGCAGACATATCAAGGGCAATTTTGAATGTGACTCAAGGAGCCAAAATGAAAACAATTGAGAATGCATGGTTGAATGGAAGCAGTTGTCCAGGATCTAATGCTCAAATTTCTTCTGCGAGTCTAGGACTCGAAAGCTTCTGGGGTCTGTTTCTTGTTATAGGTGTTTCTTGTGCATTAGCACTCATGTTCTTCTTAGCAACATTCCTATATCAGTATAGACATATTCTGTCAAGCCATCAGCCCAGTACTTCAATATGGACAAGAATTGGAACCTTGCTAAGTATCTTCAATGAGAAAGACTTGAGCTCTCACACTTTCAAGAAAAGTGCAAAGCAAGATGCAAGTGTAGCTAGTAGTCCTGCTCATCATCATGGAATAGGTTCAGCTGAGGCATCACCAAGTACACATTGCCCTTCAAGTCCTTATAGCTACACAGAATCAAATTTTTCATTCTATGGAGACCAAGTAATGTTTAGTCCAGATCGACATGGTGATGGAACTCATCAAGGTCATGAGACTCAAGACAGAGAAATGAGGGTGGTGCATGATGATACTCAAGAAGTGGCCACTACAAACAGTAATAATACTAACTCCCAAGCCACATAG 5667 0.4262 MLLWPCPSSAEKTVINVGVVLDLSETVGKIGLSCINMSLSDFYDAHPHYNTRMLLHVRDSQTDVVTAASAAVELMKKEKVEAIMGPVTSMQASFVLNLGDKAHVPIISFTATSPSLTSLGSSYFFRIAQNDSTQVHAISDIIQSFGWRQAVPIYIDNDYGRAIIPFLTNSLQQANIRVPYLAVIPPSATADHIEEELYKLMTMETRVFVVHMVGNPGSTLFAIADRIGMMKQGYVWIVTNGMANTLASLDASDIQAMQGVLGVKTYVPKTKRVVDFQARWKRRFLQDNPAMVDASINVFGLWAYDASTALASAVERANNNNSKPGFRNTTNNASRNFSEIDNIGVSQRGEELRDALSDTRFSGLAGQFGLVNGELEAATFQIINVNGNGEKVIGFWTPQKRLTRNLSSLIKSSTTDLNNNHDNVLGAMIWPGDSYSVPKGWEIPTNGKKLRIGVPVSSRPQFVKVENDGETNTTKVTGFSIDVFEAVVQALPYALPYQFIPFAKPNGESAGTYDDLIMQVYFGVFDAVVADTTIIANRSKYVDFTLPYTESGVSMVVPVKDKSKKGAWVFLKPLTWDLWMTTGCSFVFFGFVVWVLEHRINKDFRGPPSHQIGTSLWFSFSTMVFAHREKVVSNTARFVVIIWVFVVLILTQSYTANLSSLLTVEQLRPTVTNVNDLIKYRTRVGYHTGSFVRGILLNLGFKDFQLITYNSTAQCDDLLSRGSQNGGIAAAFDEIPYIRILLGTYCSKYTMVDPTFKTDGFGFVFPKSSPLVGDVSRAILKVTEDPRMKEIESAWFEKRSSCQQEDASVSSSNSLGLDSFWGLFLIAALASISALLIFAVTFLYDHRHQWWFINNDYSTWKTRIRILLRIFDQRDPRSQRFRSGGTDSNPASPFKDHLVKTAINNVRKLLGFVYSMNLVVLLGVAAVAEREVKVGAVLDVGVGMVGKMGLNSIRMCIHDFYVSNPHFKTRLQLILRDSQRNVVTAAAQALDLIKNEQVEAVIGPVTTTEAMFVINLGDKAHVPIVTFSATSPSLSSLHTPYFFQIAQKDSTQVEAITAIIQAFRWKEVVPIYVNNSYGEGLIPWLTNSLQKAYIRVPYLSAIDFSATDDAIERELYKLMTMQTRVFVVHMTPLLGSRLFAIAKAIGMMDQGYVWIVTDGMANFFNSLDSSVMDSMEGVLGVRPYIPRTKQFLDFRARWKRQFLRDNPTLVDINLNAFGIWAYDATTALAMAVEKLDSTLSGFTNVSKNSSNVTDLENFGVSRNGEKLREALSNVRFKGVGGDFKLVGGGELEASAFEIVNVIGNGEKNIGFWMPEKGLIRSMDAKTATTAYSSSKENLGRIIWPGDSYSIPKGWQIPTNGKKLMIGVPVKDSGYSEFVRIIHDPITNSTKVTGFCIDVFNAVVEALPYALSFDLIPFENSNGEMAGTYDDLVNQVYYGKSDGVVGDTTITANRSNYVDFTLPYTESGVTMVVPIKDNRKKNAWAFLKPLTWDLWVTTFCSFVFIGFVVWVLEHRINNHFRGPPSYQIGTSLWFSFSTMVFSHRERVASNCGRFVVIVWVFVVQILVQSYTASLTSLLTVEQLRPVITDVHQLLKNRLNVGYLDGSFVREILKDLGFQESQLKIYRSAEECNDLFTKGTANGGIDAAFDEVPYVTHLLQIYCSKYTMIEPRFKTGGFGFVFPKGSPLVADISRAILNVTQGAKMKTIENAWLNGSSCPGSNAQISSASLGLESFWGLFLVIGVSCALALMFFLATFLYQYRHILSSHQPSTSIWTRIGTLLSIFNEKDLSSHTFKKSAKQDASVASSPAHHHGIGSAEASPSTHCPSSPYSYTESNFSFYGDQVMFSPDRHGDGTHQGHETQDREMRVVHDDTQEVATTNSNNTNSQAT* 1889
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo10g2301 1888 Pfam Receptor family ligand binding region 965 1303 IPR001828 -
Amo10g2301 1888 Pfam Receptor family ligand binding region 34 388 IPR001828 -
Amo10g2301 1888 CDD GluR_Plant 448 796 - -
Amo10g2301 1888 Gene3D - 1259 1362 - -
Amo10g2301 1888 Gene3D - 331 450 - -
Amo10g2301 1888 Pfam Ligand-gated ion channel 1713 1743 IPR001320 GO:0015276|GO:0016020
Amo10g2301 1888 SUPERFAMILY Periplasmic binding protein-like I 10 442 IPR028082 -
Amo10g2301 1888 Gene3D - 567 694 - -
Amo10g2301 1888 Gene3D - 1482 1613 - -
Amo10g2301 1888 PANTHER GLUTAMATE RECEPTOR 2.9 932 1808 - -
Amo10g2301 1888 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 15 884 - -
Amo10g2301 1888 CDD PBP1_GABAb_receptor_plant 933 1322 IPR044440 -
Amo10g2301 1888 SUPERFAMILY Periplasmic binding protein-like II 1341 1713 - -
Amo10g2301 1888 Gene3D - 1050 1214 - -
Amo10g2301 1888 Gene3D - 132 297 - -
Amo10g2301 1888 Gene3D - 451 566 - -
Amo10g2301 1888 Pfam Ligand-gated ion channel 798 830 IPR001320 GO:0015276|GO:0016020
Amo10g2301 1888 SUPERFAMILY Periplasmic binding protein-like I 925 1345 IPR028082 -
Amo10g2301 1888 MobiDBLite consensus disorder prediction 1799 1826 - -
Amo10g2301 1888 MobiDBLite consensus disorder prediction 1847 1888 - -
Amo10g2301 1888 CDD PBP1_GABAb_receptor_plant 16 406 IPR044440 -
Amo10g2301 1888 SMART GluR_14 1364 1713 IPR001320 GO:0015276|GO:0016020
Amo10g2301 1888 SMART GluR_14 451 798 IPR001320 GO:0015276|GO:0016020
Amo10g2301 1888 SUPERFAMILY Periplasmic binding protein-like II 425 797 - -
Amo10g2301 1888 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 932 1808 - -
Amo10g2301 1888 PANTHER GLUTAMATE RECEPTOR 2.9 15 884 - -
Amo10g2301 1888 MobiDBLite consensus disorder prediction 1872 1888 - -
Amo10g2301 1888 Gene3D - 747 804 - -
Amo10g2301 1888 Pfam Bacterial extracellular solute-binding proteins, family 3 1388 1712 IPR001638 -
Amo10g2301 1888 Gene3D - 1635 1718 - -
Amo10g2301 1888 MobiDBLite consensus disorder prediction 1851 1871 - -
Amo10g2301 1888 CDD GluR_Plant 1361 1711 - -
Amo10g2301 1888 Gene3D - 1363 1481 - -
Amo10g2301 1888 Pfam Bacterial extracellular solute-binding proteins, family 3 472 797 IPR001638 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo10g2301 Amo-Chr10 80588782 80606873 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo10g2301 1 893 Ion Channels AT2G29120 50.503 0.0 885
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo10g2301 K05387 - pvy:116139285 1073.92