Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo10g2284 ATGCATGGCGAACTCGACAATGTCTACAAAACCCTCAAGCATCTCGAGGAAACCCAAAACATCAAAATCGATCTCCTCCTCTGCTGTGGAGATTTCCAGGCTGTTAGGAATGAGCAAGATTTGAAAAGCATGAACGTTCCCCCGAAATTCCGATCCATGAATTCCTTCTGGAAGTACTATTCTGGCTTGGAGGTTGCTCCTTATCCCACCATCTTCATCGGTGGCAACCATGAAGCCTCCAATTACTTGTGGGAAATGTATTATGGAGGATGGGCTGCACCTAATATATATTTCTTGGGAGTTGCTGGGGTAATCAAGTTTGGGAATGTTCGAATTGGTGGGCTTTCCGGAATTTATAATGCTCGCCACTATAAATCAGGACACTTTGAGAGACCTCCCTATGATCAGAGCACCATCAGGTCTGTGTATCATGTTCGAGAATACGATGTTCACAAACTCATACAAATTGAGGAACCGATTGATATCTTTCTTTCTCATGATTGGCCCGTGAGAATCACTGATTGTGGGGATTGGAGGGAGCTTGTACGGCGAAAGCCCTTTTTTAAGCAGGAGATTGAGGAAGGAAGACTTGGGAGTAAAGCTGCTTCTCAACTTCTAGGTAAACTGAAACCACAATATTGGTTTTCTGCTCATTTACATTGCAAGTTTGCTGCTCTTGTTCAGCACGGGGAAGGAGGTCCGCTGACAAAATTCCTTGCACTTGATAAATGTCTTCCTCGGCGCGACTTCTTGCAGATAGTGGAAATCGAATCAGAGGCAGGCCCTTATGAGATTCAGTATGATGAAGAATGGTTAGCCATAACAAGGAGGTTCAACTCTATATTCCCGCTGACACCCAAGGGTGCAGATTTCAGAGGTGTGAATCTTGAGATGGATGATTGTCGCCAATGGGTTAGAAGCAGGTTACAACAGAGAGGGTGCAAACCTTTTGAATTTGTTAAAACTGCTCCGTGTTATGATCCTTCTCAATCCAATTTTCATGGTTCTTTTGCTGGTTGTCATCGGAATCCTCAAACAGAATCTCTTTTACAGTTTCTTGACCTTCCATACCTCCTTGATAAGAATCCTGAATCAACTGACTTGTCACCTTATCCTTCTCGCTCCATTGGAAGAGATAGCCTCTCTTTCAACTTCTATGCAGCTTCATGCCCTTCAGCTGAGTTCATCATAAGGGACATAGTTACCTCTTCCTCTTCCAATGATCCTTCCATTCCAGGAAAGCTCCTCCGCTTGGTTTTCCATGATTGCTTTGTGGAGGGATGCGATGCATCTTTGATGCTAATTGGGAACAATACTGAGCAAACTGATCCAGGAAATAGGTCTGTTGGTGGATATTCAGTTATAGAATCAGCAAAAAGACTCCTTGAGATGCTTTGCCCTGAAACTGTTTCTTGTGCGGATATCATTGCTCTTGCAGCCAGAGATGCAGTTGGAATTGCTGGTGGACCAATGGTTCAAATTCCCACAGGAAGAAGAGATGGAATGGTTTCGCTTGCTTCGAATGTCAGGCCTAACATCGTGGACACAAGAGCTCACACCATCGGAGCGGCTCATTGCAATGCATTCAGAGGCCGATTCCAAGAAGACACGAAGGGACGGCTCACACTCATCGACAAGACTCTGGACAGTAACTATGCTGTTGAGCTAATGAAACAGTGTCCAGCAAGTGCAATGGCATCTGCTACAGTGAACAATGATCCTGAAACACCTATGGTCTTTGACAACCAGTACTATCGGAATCTCTTGGTGCACAAAGGGCTTTTCCAGTCAGATTCTGCTTTGCTGAATGAAAACAGCACAAGAACAATGGTGAAGGATTTTGCAAACAATCAACAACTTTTCTTTGTAAATTGGAGCCAAGCTTTCTTGAAGCTCACAAGTGTTGGAGTGAAAACAGGGAATGAGGGTGAAATTAGACGTACTTGTGCATCAACTAATGCATAA 1965 0.4407 MHGELDNVYKTLKHLEETQNIKIDLLLCCGDFQAVRNEQDLKSMNVPPKFRSMNSFWKYYSGLEVAPYPTIFIGGNHEASNYLWEMYYGGWAAPNIYFLGVAGVIKFGNVRIGGLSGIYNARHYKSGHFERPPYDQSTIRSVYHVREYDVHKLIQIEEPIDIFLSHDWPVRITDCGDWRELVRRKPFFKQEIEEGRLGSKAASQLLGKLKPQYWFSAHLHCKFAALVQHGEGGPLTKFLALDKCLPRRDFLQIVEIESEAGPYEIQYDEEWLAITRRFNSIFPLTPKGADFRGVNLEMDDCRQWVRSRLQQRGCKPFEFVKTAPCYDPSQSNFHGSFAGCHRNPQTESLLQFLDLPYLLDKNPESTDLSPYPSRSIGRDSLSFNFYAASCPSAEFIIRDIVTSSSSNDPSIPGKLLRLVFHDCFVEGCDASLMLIGNNTEQTDPGNRSVGGYSVIESAKRLLEMLCPETVSCADIIALAARDAVGIAGGPMVQIPTGRRDGMVSLASNVRPNIVDTRAHTIGAAHCNAFRGRFQEDTKGRLTLIDKTLDSNYAVELMKQCPASAMASATVNNDPETPMVFDNQYYRNLLVHKGLFQSDSALLNENSTRTMVKDFANNQQLFFVNWSQAFLKLTSVGVKTGNEGEIRRTCASTNA* 655
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo10g2284 654 Pfam Peroxidase 518 617 IPR002016 GO:0004601|GO:0006979|GO:0020037
Amo10g2284 654 Pfam Peroxidase 403 512 IPR002016 GO:0004601|GO:0006979|GO:0020037
Amo10g2284 654 PRINTS Haem peroxidase superfamily signature 470 487 IPR002016 GO:0004601|GO:0006979|GO:0020037
Amo10g2284 654 PRINTS Haem peroxidase superfamily signature 412 426 IPR002016 GO:0004601|GO:0006979|GO:0020037
Amo10g2284 654 PRINTS Haem peroxidase superfamily signature 488 500 IPR002016 GO:0004601|GO:0006979|GO:0020037
Amo10g2284 654 PRINTS Haem peroxidase superfamily signature 573 588 IPR002016 GO:0004601|GO:0006979|GO:0020037
Amo10g2284 654 Gene3D - 2 236 IPR029052 -
Amo10g2284 654 PANTHER RNA LARIAT DEBRANCHING ENZYME 1 369 - -
Amo10g2284 654 ProSiteProfiles Plant heme peroxidase family profile. 380 653 IPR002016 GO:0004601|GO:0006979|GO:0020037
Amo10g2284 654 SUPERFAMILY Metallo-dependent phosphatases 2 234 IPR029052 -
Amo10g2284 654 CDD MPP_Dbr1_N 1 251 IPR041816 -
Amo10g2284 654 Pfam Calcineurin-like phosphoesterase 1 221 IPR004843 GO:0016787
Amo10g2284 654 Gene3D Peroxidase, domain 2 518 632 - -
Amo10g2284 654 SUPERFAMILY Heme-dependent peroxidases 381 653 IPR010255 GO:0004601|GO:0006979|GO:0020037
Amo10g2284 654 Gene3D - 633 653 - -
Amo10g2284 654 Pfam Lariat debranching enzyme, C-terminal domain 236 356 IPR007708 GO:0006397|GO:0016788
Amo10g2284 654 SMART DBR1_2 227 359 IPR007708 GO:0006397|GO:0016788
Amo10g2284 654 CDD secretory_peroxidase 381 649 IPR033905 GO:0004601|GO:0042744
Amo10g2284 654 Gene3D - 384 513 - -
Amo10g2284 654 PRINTS Plant peroxidase signature 587 604 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo10g2284 654 PRINTS Plant peroxidase signature 390 409 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo10g2284 654 PRINTS Plant peroxidase signature 627 640 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo10g2284 654 PRINTS Plant peroxidase signature 469 479 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo10g2284 654 PRINTS Plant peroxidase signature 488 503 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo10g2284 654 PRINTS Plant peroxidase signature 571 586 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo10g2284 654 PRINTS Plant peroxidase signature 414 434 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo10g2284 654 PRINTS Plant peroxidase signature 450 463 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo10g2284 Amo-Chr10 79986240 79991604 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo10g2284 381 653 Peroxidase AT4G31760 59.396 1.68e-126 375
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo10g2284 K18328 - gmx:100812726 669.848
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo10g2284 10 79986240 79991604 Amo20g2719 20 125145026 125150387 hybridization