Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo10g2272 ATAAATGTTTTTTTGGTGCTGGACCTGTGTAGAAGCCCCACCCTTGAGAAGGCTGCGCTGGTGGCTGCACCCAACACACAGCAAGAGGGTCTTGACCAGCTGGAGGACCATGACCTTGGATTCCACGAAGACTCCAACCCACCCTTGTTTAAGACCACCCTCCCTAATGTCCCTGACTTCTCTCCTTCCTTCGACCCACACTTCGAATTCCCAGACATCCAAACCATATCCTACAACTACGCCAATACCACTGCCACCCTCGACCGCCTCCTCCATGACACCTCCAATAATTCTTTCGCCACCGGCTTCGATTTCATAGAGGAGCTCATCTGTGCTGCCGATTGCTTCGACACCAACCACCTCCACGTCGCTCACGTCATATTGGACCGACTCAATCAACGCCTCCGATCCCCTGCCGGTGCAAAGCCTCTCCAACGTGTCGCCTTCTACTTCAAGAAGAGGAGTGGGTCGCGGTGGGGAGGCGGAGAGGGTCTGACGATTAATGTGAAAGAGAAGAGGAAGGTTAACATTACAACTCTCAAATCAAACATGAGTAGATGGTGTCACCAAACTCTAATATGGACA 585 0.5197 INVFLVLDLCRSPTLEKAALVAAPNTQQEGLDQLEDHDLGFHEDSNPPLFKTTLPNVPDFSPSFDPHFEFPDIQTISYNYANTTATLDRLLHDTSNNSFATGFDFIEELICAADCFDTNHLHVAHVILDRLNQRLRSPAGAKPLQRVAFYFKKRSGSRWGGGEGLTINVKEKRKVNITTLKSNMSRWCHQTLIWT 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo10g2272 195 PANTHER SCARECROW-LIKE PROTEIN 15 37 178 - -
Amo10g2272 195 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 37 178 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo10g2272 Amo-Chr10 79847532 79850737 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo10g2272 102 157 GRAS Transcription Factor Family AT4G36710 64.286 1.22e-17 78.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Amo10g2272 GRAS 1e-05 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo10g2272 - - aip:107640116 263.848