Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo10g2264 ATGGCTGGTTGTTCAATAGTTTCCTCTGCAATCTTCACCTTGTTTCTTCTCTTTGGATTCTCCTCAGCTAAGGAGCACTTGGTTGGTGGCAAGATTGATGCTTGGAAGATTCCATCCTCTGAAGCCAACTCTCTCAACAAATGGGCTGAAAGATCTCGTTTCCAAGTTGGCGATCATCTTGTGTGGAAATACAATGGCAGAAAAGACTCGGTTTTGGAAGTGGACAAAGAAGACTATGGTAACTGCAGCACCTCAAACCCAATGAAGGAGTACAATGATGGCATCACTAAGGTGGAGCTTGACCGTCCAGGCGCATTCTACTTCATCAGTGGGGCAAAGGGTCACTGCGAGAAAGGCCAGAAGCTCGTTGTCGTCGTTATGTCTCCGAGGGGAGGAAGATGGTCTGCTGGTTTCTCTCCAGCGCCTTCTCCGGCACCATCAGGAGAGTTTGAAGGTCCAGCTGTTGCTCCGAGTAGTGATGCCACGGTTTTGAAGAGTGGCCTTCTGATGGCTCTGGGAGTGGTGGCTATGAGTGTGGGCTGTTTTCTGATGTGA 555 0.4937 MAGCSIVSSAIFTLFLLFGFSSAKEHLVGGKIDAWKIPSSEANSLNKWAERSRFQVGDHLVWKYNGRKDSVLEVDKEDYGNCSTSNPMKEYNDGITKVELDRPGAFYFISGAKGHCEKGQKLVVVVMSPRGGRWSAGFSPAPSPAPSGEFEGPAVAPSSDATVLKSGLLMALGVVAMSVGCFLM* 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo10g2264 184 PANTHER EARLY NODULIN-LIKE PROTEIN 3 8 177 - -
Amo10g2264 184 Gene3D - 22 130 IPR008972 -
Amo10g2264 184 CDD OsENODL1_like 24 127 IPR041846 -
Amo10g2264 184 ProSiteProfiles Phytocyanin domain profile. 24 128 IPR003245 GO:0009055
Amo10g2264 184 PANTHER BLUE COPPER PROTEIN 8 177 IPR039391 GO:0009055
Amo10g2264 184 SUPERFAMILY Cupredoxins 23 127 IPR008972 -
Amo10g2264 184 Pfam Plastocyanin-like domain 35 120 IPR003245 GO:0009055
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo10g2264 Amo-Chr10 79509253 79510328 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo10g2264 10 175 Phytocyanin Superfamily AT2G25060 54.167 5.97e-55 170
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo10g2264 - - ahf:112782998 367.081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo16g3738 16 148754599 148755521 Amo10g2264 10 79509253 79510328 PCT
Amo10g2264 10 79509253 79510328 Amo16g3738 16 148754599 148755521 PCT