Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo10g2230 ATGGAACTTGTTCTATCATCAATTCTAGAGAAATTGCAACATCAACCAAATTCATCAACCCTCTCTACCATATGTTTCATAATCATAAGCATCTTGTGTATTCTTAGGTTCACAAGAAGAAACAACAAGTTCAATAACCTTCCACCATCTCCACCAAAGCTACCATTAATTGGAAACCTTCATCAACTAGGAACACTTCCACACCAATCTTTAAAGGCACTTTCTCACAAATATGGCCCTCTTTTGTTGCTTCAATTAGGGCAAACTCAAGCCCTAGTTGTCTCTTCATCAGATCTTGTTGAAGAGATAGTGAAAACACATGATGTTGCTTTCTCCAATAGAGCAAATACTAAAGCTTCAAAGGTATTCTTCTATCAATGCAAGGAGATTGGTTTTGCACCCTATGGAGAGGAATGGAGAAGGAAAAGGAAGTTGTGTGTTCTTGAGCTTCTAAGCACAAATAGGGTAAAGTCGTTTCAACCCATTAGAGAAAATGAAGTATTAATGATGATTAATTCTATACATGAAGCTTGTACAAAAGGATCGTCAGTGAATCTATCTAAGATGATTGCTGCAACATCAATGAACATATCTAGTAGGTGCATTTTCGGACTAAGGTTCGAAACAAGTGATGATGGTAGAAAAAGCATTGTGGAGGTTGTGAGGAAGATGATGACACAATTATCAAAACTTGGGGTTGGAGATTTGTTCCCTTCATTGGATTGGGTTGATGTTCTTACAGGTTTCACGTCAAGATTAAAGGTTATTCATGCTGATTTTGATACGTTCTTAGAAGAGATTATTGAAGAACATAAGAGAAAGAAGAGAAATTGTGATGATAATAATAAAGACTTTGTTGATGTACTTCTTCAACTTCAAGAGAGGGACATGCTTGAGTTTGAGCTCAATGGAGATACCATGAAAGCACTCCTTGTGGTTTTATTTCAATTCTCTTCCTTTAATAATAATAATAATAATAAATACAGTGAAGCTCTTTTAGGCAAAGATATGTTTGTTGCGGGAAGTGACACTGTTTCAACAACTATTGAATGGGTCTTTGCAGAACTTGCTAATAATCCAAAGACCATGAAAAAAATACAAGAAGAGGTAAGAAGAATTGTGGGTGGAAAATCCATGATAGAGGAAAATGACCTAAATCAAATGAAGTACATGAAGTGTGTAATCAAAGAAACTCTTAGATTACATCCACCAGGTCCACTTTTGATTCCAAGAGAAACAGCAAATAGTGTGGAAATAAAAGGGTACCACATTCCCAAAAAAGTAACCGTGTATATAAATTCATATGCAATTCATAGAGACCCTAAATTATGGGACAATGCTGAAGAGTTTATTCCTGAAAGATTTGAAGGTACCCAACAAGCTGATTATAAGGGAATAGGTTTTCAATTGATCCCATTTGGAATTGGGAGAAGGGCTTGTCCCGGAGTTTCATTTGCAGTTGCTTCTCTTGAGTATGTGATGGCTAATCTTCTCTATTTATTTGATTGGAAGGTTCCTAATAATAATGGTGCATTGATAGATATGAGTGAGTTGAGTGGGTTAACCATTAGCAAAAAACATCCACTTTATTTAGAGCCAATGCCTTACTTAATTTGTTGA 1620 0.358 MELVLSSILEKLQHQPNSSTLSTICFIIISILCILRFTRRNNKFNNLPPSPPKLPLIGNLHQLGTLPHQSLKALSHKYGPLLLLQLGQTQALVVSSSDLVEEIVKTHDVAFSNRANTKASKVFFYQCKEIGFAPYGEEWRRKRKLCVLELLSTNRVKSFQPIRENEVLMMINSIHEACTKGSSVNLSKMIAATSMNISSRCIFGLRFETSDDGRKSIVEVVRKMMTQLSKLGVGDLFPSLDWVDVLTGFTSRLKVIHADFDTFLEEIIEEHKRKKRNCDDNNKDFVDVLLQLQERDMLEFELNGDTMKALLVVLFQFSSFNNNNNNKYSEALLGKDMFVAGSDTVSTTIEWVFAELANNPKTMKKIQEEVRRIVGGKSMIEENDLNQMKYMKCVIKETLRLHPPGPLLIPRETANSVEIKGYHIPKKVTVYINSYAIHRDPKLWDNAEEFIPERFEGTQQADYKGIGFQLIPFGIGRRACPGVSFAVASLEYVMANLLYLFDWKVPNNNGALIDMSELSGLTISKKHPLYLEPMPYLIC* 540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo10g2230 539 Coils Coil 264 284 - -
Amo10g2230 539 Pfam Cytochrome P450 48 520 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo10g2230 539 Gene3D Cytochrome P450 33 532 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo10g2230 539 PANTHER CYTOCHROME P450 71B11-RELATED 20 535 - -
Amo10g2230 539 SUPERFAMILY Cytochrome P450 48 533 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo10g2230 539 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 473 482 IPR017972 GO:0005506|GO:0016705
Amo10g2230 539 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 20 535 - -
Amo10g2230 539 PRINTS E-class P450 group I signature 392 410 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo10g2230 539 PRINTS E-class P450 group I signature 329 346 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo10g2230 539 PRINTS E-class P450 group I signature 193 211 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo10g2230 539 PRINTS E-class P450 group I signature 480 503 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo10g2230 539 PRINTS E-class P450 group I signature 433 457 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo10g2230 539 PRINTS E-class P450 group I signature 470 480 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo10g2230 539 PRINTS E-class P450 group I signature 99 120 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo10g2230 539 PRINTS E-class P450 group I signature 75 94 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo10g2230 539 PRINTS E-class P450 group I signature 349 375 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo10g2230 539 PRINTS P450 superfamily signature 340 357 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo10g2230 539 PRINTS P450 superfamily signature 480 491 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo10g2230 539 PRINTS P450 superfamily signature 471 480 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo10g2230 539 PRINTS P450 superfamily signature 393 404 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo10g2230 Amo-Chr10 77702203 77705438 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo10g2230 41 537 Cytochrome P450 AT3G48280 39.279 8.86e-129 383
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo10g2230 K20617 - aip:107632412 587.415