Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo10g2228 ATGTCTCTTCCAAATCCAACTCTTTGCTTAACAATTTTTGGGTTCATAAGCATCTTTCTAGTGCTTAAGATCACAAGAAGAAATTACAAGCCAAATAATAATAAAAATCTTCCACCATCACCACCAAAGCTTCCCTTCATTGGAAACCTTCATCAATTTGGAACACTGCCACACCGATCCTTCCATGAACTCTCAAACAAGCATGGCCCTCTCATGTTCCTTCAATTGGGACAAACACCAGCCATTGTGGTTTCTTCGGCCGAGGTGGCCGAAGAAATCATCAAGAAACATGATATTGCTTTCTCCAACAAGCCCCAAACAACATCTGGAAAAATCATTCTCTATGGATGCTCCGATGTCGTTTTCGCACCCTATGGCGAAGAATGGAGACAAAAAAGAAAAATTTGTGTTCTCGAACTTTTAAGCCTCAAAAGAGTGAAGTCTTTTAAATACATTCGTGAAGAAGAGATTATGGAATTGGTTGGTACCTATGATTTACAAATACTTTTAATATATGTTGATACCATACGTGCAAGGAAAGGATTTTCTATAAATATTAGTGAGTTGATAATTGCAACATCAAACAACATAGTGTCAAGATGTGTTCTTGGACAAAAGTATGATAATCCAGATGGTAATAGCAGCTTTGGAGAGCTTGGAAGGAAGATGATGAGAGAATTGGCTGCTTTTAGTGTGGGAGATTTCTTCCCTTTCTTGGGTTGGCTTGATTTTCTCACTGGCCAAATACAAGAATTCAAGGCCACTTTTCATGCATTAGATGCTTTCTTTGATAAGGTGATTGAAGAACATAGGAGGAAAATGATGAAGAAAGAGGATGTTAAAAAGGGTCAATTAGACAAGATGGATTTTGTTGATATACTACTCCAAGTTCAAAAAGATGGTGTGCATGACTTTCAACTCACCAATGATAATCTCAAAGCAATCTTAGTGGACATGTTTGCTGGAGCGAGTGACACTACTTCAACACTTTTGGAATGGACATTAGCAGAACTGATTAAGAATCCAAACACCATGAAGAAAGTTCAAGAAGAAGTAAGAAAAGTTGTTGGGTGCAAATCAAAAATAGATGAAATTGATGTTAATCAAATGGAGTACCTAAAATGTGTAATAAAAGAGACTTTAAGGTTGCATCCACCAGCTCCTTTCTTAACACCTAGAGAAACCCTAAGTGATGTGAAGCTAAAAGGGTTTGATATTCCATCAAAAACAAGAGTATTTATAAATGCATGGGCAATTCAAAGGGACCCAAAAATTTGGAAGAACCCTGAAGAGTTCATTCCTGAAAGATTTGAGGAAAACCAAGTTGATTTTCTAAGACAAGATTTTCATTATGTCCCCTTTGGTTTTGGAAGGAGAGGATGTGCTGGAATTTCATTGGCACTTGCTTCTACTGAAGTCATTCTTGCTAATCTCCTATATTGGTTTAATTGGAAACTACCTAATAATAGTGTAGGTGTGACTATGAAAGATATTGACATGACCATTTTTGGCTTCATAACCATCTTTCTTGTGCTTAATTTCACAATAACAAAAAAAGGACGAAAATCCAATAATCTTCCACCATCACCACCAAAGCTACCATTCATTGGAAACCTTCATCAACTAGGAACATTGCCCCACCGTTCCTTCCATGAACTCTCAAAGAAGCATGGCCCTCTCATGTCCCTTCAACTTGGACAAACACCAGCCATTGTTGTTTCTTCGGTTGATGTGGCCAAAGAAATCATCAAAAACCATGATGTTGTTTTCTCCAACAGGCCCCAAACAACATCCGAGAGAATCATTATGTATGGATGCAAGGATGTTGCTTTTGCACCCTATGGTGACGAGTGGAGACAGAAAAGAAAAATTTGTGTTCTTGAGCTTCTAAGCCTTAAAAGAGTGCGATCCTTTCAATCCATTCGTGAAGAGGAGGTTGCCGAATTGTTGATAATTGCAACATCAAACAACATAGTGTCAAGATGTGTTCTTGGACAAAAGTATGATAATAATCCAGATGGTAGTGGCAGCTTTGGAGAGCTTGGAAGGAAGATGATGAGAGAATTGGCTGCTTTTAGTGTGGGAGATTTCTTCCCTTTATTGGGTTGGCTTGATTTTCTCACTGGCCAAATACAAGAATTCAAGGCCACTTTTCATGCATTAGATTGTTTCTATGATAAGGTACTTGAAGAACATAGGAGGATGATTAAGAAAGGAAATGATGATAAGAAAGACTTTGTTGATTTACTGCTTCAAGTTCAAGAGGATGGTGTGCATCATGATTTTCACCTCTCCAATGATAATCTCAAAGCAATCCTAATGGACGTGTTTGCCGGAGGTGGTGACACTACTTCAACACTTTTGGAGTGGACATTTGCAGAACTGATTAAGAATCCAAAGATCATGAAGAAAGTTCAAGAAGAAGTAAGAAATGTTGTTGGGTATAAACAAAAGATAGATGAAAATGATGTGAATGAAATGGAATACATGAAATGTGTGATCAAAGAAATTCTAAGATTGCATCCACCTGCTCCTTTATTAATACCCCGTGAAACCCTAAGTGATGTGAAGCTAAAAGGTTATGATATTCCATCAAAGACAAAGGTATATTTGAATGCATGGACAATTCAAAGAGACCCCGAAATTTGGAACAACCCTGAAGAGTTCATTCCTGAGAGATTTGAGAAAAGTCAAATTGATTTTATGGGTCAACATTTGGAACTTATACCCTTTGGTTTCGGAAGAAGGGGTTGTGCTGGAATTTCATTTGCAATTGCTTCCACTGAACATATTCTTGCTAATCTTCTATGTTGGTTTGATTGGAAGCTGCCCAATAATAATAATAATGATGATGATGATGTTGGTGTCACTAAAATGCAAGACATTGATATTGAAAGAAGAATGGCACCAATTGCATATGTTCTAAAGCAATTGCCATGTGAGCTTAACTCAACCCTTTACCTTTCAATTCTAGTTGGCACCATTAGCATCCTTCTTGTGCTTAATCTCATCATCACAAGAAAAAGAAACAAATCCATTAATCTTCCACCATCACCACCAAAGCTACCTTTCATTGGAAACCTTCACCAATTAGGAACATTGACACACCGTTCTTTCAAAGAACTCTCCAACAAGCATGGCCCTCTCATGTTCCTTCATCTAGGGCAAATCCCAACACTAGTGGTTTCGTCGGCGAAAGTAGCCAAAGAAATCGTCAAAAACCAAGATATTATTTTCTCAAACCGTCCCCAAACTACGGCCGCAAACATCTTTTTTTATGGTTGCAAAGATCTAGGGTTTATGCCCTACGGTGAAGAATGGAGACAGAAAAGAAAAGTTTGTGTTCTTGAACTTCTAAGTCTCAAAAGGGTTAAATCTTTTCTCTCAATAAGAGAACAAGAAGTTGTAGAACTCGTTGATACTATTCGAAAAGCGTGTTCAAGAGACGACTCGCCGTCATCTTTTGTGATTAATCTTAGTGAGTTGATGATTGCTACATCAAACAACATTGTTTCAAGATGTGTTCTTGGACAAAAGTATGATATCSCAGATGGGAGTGGACATGGAAGCTTTGGAGAGCTTGGGAGGAAGGTGATGGGGCAACTCACTGAATTTTGTGTTGGTGATTTCTTTCCTACATTGGGTTGGATTGATGTTGTTAGAGGCTTGATTTCTGAATTTAATGCTACCTTTGTAGAATTAGATTCTTTCTTGAATGGGGTAATTGAAGAGCATAAGAAAAATAAGAAGAATGATGGTGAGGATGATAATAAAGACTTTTTGGATATACTTCTTCATCTTCAAGAGAAGGGTTTGCTTGAATTTAAACTCACTCTAGAAGATCTCAAAGCAATGCTAATGGACATGTTTGTTGGAGGGAGTGATACTACTTCAACAAATTTAGAATGGATTTTTACTGAGCTCCTTAGGAACCCAAATACCATGAAGAAAGTTCAAGAAGAGATAAGGAGAATTGTTGGTAACAAATCAAAGGTAGATGAAAATGATATAAATCAAATGAACTATTTGAAATTTGTGATCAAAGAAGGTCTTAGGTTACATCCACCTGTTCCTATCTTAGTTCCTAGACAAACAACATCAAATGCAAAAGTAAAAGGTTATGATATTCCTTCAAAAACAACTGTATATTATAATGTTTGGGCAAATTCATAG 4173 0.3726 MSLPNPTLCLTIFGFISIFLVLKITRRNYKPNNNKNLPPSPPKLPFIGNLHQFGTLPHRSFHELSNKHGPLMFLQLGQTPAIVVSSAEVAEEIIKKHDIAFSNKPQTTSGKIILYGCSDVVFAPYGEEWRQKRKICVLELLSLKRVKSFKYIREEEIMELVGTYDLQILLIYVDTIRARKGFSINISELIIATSNNIVSRCVLGQKYDNPDGNSSFGELGRKMMRELAAFSVGDFFPFLGWLDFLTGQIQEFKATFHALDAFFDKVIEEHRRKMMKKEDVKKGQLDKMDFVDILLQVQKDGVHDFQLTNDNLKAILVDMFAGASDTTSTLLEWTLAELIKNPNTMKKVQEEVRKVVGCKSKIDEIDVNQMEYLKCVIKETLRLHPPAPFLTPRETLSDVKLKGFDIPSKTRVFINAWAIQRDPKIWKNPEEFIPERFEENQVDFLRQDFHYVPFGFGRRGCAGISLALASTEVILANLLYWFNWKLPNNSVGVTMKDIDMTIFGFITIFLVLNFTITKKGRKSNNLPPSPPKLPFIGNLHQLGTLPHRSFHELSKKHGPLMSLQLGQTPAIVVSSVDVAKEIIKNHDVVFSNRPQTTSERIIMYGCKDVAFAPYGDEWRQKRKICVLELLSLKRVRSFQSIREEEVAELLIIATSNNIVSRCVLGQKYDNNPDGSGSFGELGRKMMRELAAFSVGDFFPLLGWLDFLTGQIQEFKATFHALDCFYDKVLEEHRRMIKKGNDDKKDFVDLLLQVQEDGVHHDFHLSNDNLKAILMDVFAGGGDTTSTLLEWTFAELIKNPKIMKKVQEEVRNVVGYKQKIDENDVNEMEYMKCVIKEILRLHPPAPLLIPRETLSDVKLKGYDIPSKTKVYLNAWTIQRDPEIWNNPEEFIPERFEKSQIDFMGQHLELIPFGFGRRGCAGISFAIASTEHILANLLCWFDWKLPNNNNNDDDDVGVTKMQDIDIERRMAPIAYVLKQLPCELNSTLYLSILVGTISILLVLNLIITRKRNKSINLPPSPPKLPFIGNLHQLGTLTHRSFKELSNKHGPLMFLHLGQIPTLVVSSAKVAKEIVKNQDIIFSNRPQTTAANIFFYGCKDLGFMPYGEEWRQKRKVCVLELLSLKRVKSFLSIREQEVVELVDTIRKACSRDDSPSSFVINLSELMIATSNNIVSRCVLGQKYDIXDGSGHGSFGELGRKVMGQLTEFCVGDFFPTLGWIDVVRGLISEFNATFVELDSFLNGVIEEHKKNKKNDGEDDNKDFLDILLHLQEKGLLEFKLTLEDLKAMLMDMFVGGSDTTSTNLEWIFTELLRNPNTMKKVQEEIRRIVGNKSKVDENDINQMNYLKFVIKEGLRLHPPVPILVPRQTTSNAKVKGYDIPSKTTVYYNVWANS* 1391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo10g2228 1390 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 8 501 - -
Amo10g2228 1390 PANTHER CYTOCHROME P450 71B11-RELATED 8 501 - -
Amo10g2228 1390 Pfam Cytochrome P450 527 949 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo10g2228 1390 Pfam Cytochrome P450 38 490 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo10g2228 1390 Pfam Cytochrome P450 1016 1388 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo10g2228 1390 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 911 920 IPR017972 GO:0005506|GO:0016705
Amo10g2228 1390 SUPERFAMILY Cytochrome P450 527 948 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo10g2228 1390 Gene3D Cytochrome P450 512 968 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo10g2228 1390 PANTHER CYTOCHROME P450 71B11-RELATED 984 1388 - -
Amo10g2228 1390 PANTHER CYTOCHROME P450 71B11-RELATED 505 954 - -
Amo10g2228 1390 Gene3D Cytochrome P450 1008 1390 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo10g2228 1390 Gene3D Cytochrome P450 30 507 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo10g2228 1390 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 984 1388 - -
Amo10g2228 1390 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 505 954 - -
Amo10g2228 1390 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 454 463 IPR017972 GO:0005506|GO:0016705
Amo10g2228 1390 SUPERFAMILY Cytochrome P450 38 520 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo10g2228 1390 PRINTS P450 superfamily signature 832 843 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo10g2228 1390 PRINTS P450 superfamily signature 909 918 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo10g2228 1390 PRINTS P450 superfamily signature 779 796 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo10g2228 1390 PRINTS E-class P450 group I signature 89 110 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo10g2228 1390 PRINTS E-class P450 group I signature 415 439 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo10g2228 1390 PRINTS E-class P450 group I signature 193 211 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo10g2228 1390 PRINTS E-class P450 group I signature 461 484 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo10g2228 1390 PRINTS E-class P450 group I signature 311 328 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo10g2228 1390 PRINTS E-class P450 group I signature 451 461 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo10g2228 1390 PRINTS E-class P450 group I signature 374 392 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo10g2228 1390 PRINTS E-class P450 group I signature 65 84 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo10g2228 1390 PRINTS E-class P450 group I signature 331 357 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo10g2228 1390 SUPERFAMILY Cytochrome P450 1016 1388 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo10g2228 Amo-Chr10 77651816 77690417 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo10g2228 518 955 Cytochrome P450 AT3G48270 43.297 2.74e-127 401
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo10g2228 - - fve:101308399 725.702