Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo10g2208 CCTCAGTCCGAACAAGAAGATAGCAGCGAGGTAGAAGAAGCAGCAACTTCATCTGACGAGGACGAAGACATAGACGAAGGCGAAGATGAACGTGAGAAACACGTGCTGGTTCCCAAGAAGCTTCAACCGCAAAAGGTTTCCAAACTCTCGTCATCTTCTTCTAAACCCTCTCCAAAGTTGAAGTCTCAACCTTCGGCTTCTGTCAGTCAAACCAAATCCGGGTCAAAGCGCGCAGCCAAAAACAGTATCGACCACTCAAACCAACCAAAACGTGGGAAGAAGGCACAGGAGGATCACGCCATCGGCTCCATTGAAGAGGATCCGCAGAAATCCAAATCCCTCTTTCAGAGGGTTTTCAACGAGGAAGATGCGATAGGTATCTTGAAAGGCTTGTCTGAGTTCATCGCGAAAACAGGGAAGGAACCCTATAAATGCGTTGATGAATTTTACGATTTTATGAAGGGGTCGAATTTGATTCGGGCAAATGTATCATGCATGCAATTGAAGGATAAGATCCGCCGGCTGAAGAAGAAGTTTGAGAACAACCTAGAAAAAGAGAAGAACGGCAAGGGGACAACCTTAAAGCCGCACGAGTTGGAAGCATTTCAGTTGGAAAAGAATGTTTGGGGCCACGATGGCCGTGGCGGTGAAGCAGTGCTCAAGGAAACTACGGAAAAGGATACAGTTAATAATGAGAAGGCTGCGAAGATTACTCCCAAGAAGGCAAGGATGAGTGAATTTTCTGTGACTAGTTTAGCTTTGACTTCAATGTTGATATACGATGGGACTTTTGGTAAGACTTTCGGTAAAGATTATATTAGAAAGGGAATAGAGTTACTTGGAGTCTCAAAGAGGGAAGACATCGAGGCTAGGTGGAGAAAGTTCAAAGACGCTGAAAATAAATTGTATGCGGAGATAGCTGAATTCTACGCAGAACAAGCTAAGTTGATATATCAAGCAAATAGCTCATCGTCCTCCTATATAGTTAAGGATGATACATTATCTAAAACAGGACGAAGTGTATCGAGCATTTGTGGAATATGCAATTGTATGAATTTAGTATAG 1065 0.4347 PQSEQEDSSEVEEAATSSDEDEDIDEGEDEREKHVLVPKKLQPQKVSKLSSSSSKPSPKLKSQPSASVSQTKSGSKRAAKNSIDHSNQPKRGKKAQEDHAIGSIEEDPQKSKSLFQRVFNEEDAIGILKGLSEFIAKTGKEPYKCVDEFYDFMKGSNLIRANVSCMQLKDKIRRLKKKFENNLEKEKNGKGTTLKPHELEAFQLEKNVWGHDGRGGEAVLKETTEKDTVNNEKAAKITPKKARMSEFSVTSLALTSMLIYDGTFGKTFGKDYIRKGIELLGVSKREDIEARWRKFKDAENKLYAEIAEFYAEQAKLIYQANSSSSSYIVKDDTLSKTGRSVSSICGICNCMNLV* 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo10g2208 354 MobiDBLite consensus disorder prediction 1 110 - -
Amo10g2208 354 PANTHER STOREKEEPER PROTEIN 5 321 - -
Amo10g2208 354 PANTHER BNAANNG10740D PROTEIN-RELATED 5 321 IPR007592 GO:0006355
Amo10g2208 354 Coils Coil 158 189 - -
Amo10g2208 354 MobiDBLite consensus disorder prediction 44 82 - -
Amo10g2208 354 MobiDBLite consensus disorder prediction 1 28 - -
Amo10g2208 354 Pfam Protein of unknown function, DUF573 115 210 IPR007592 GO:0006355
Amo10g2208 354 MobiDBLite consensus disorder prediction 83 110 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo10g2208 Amo-Chr10 77359732 77361506 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo10g2208 62 213 GeBP Transcription Factor Family AT1G61730 37.500 7.28e-19 85.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GeBP Amo10g2208 DUF573 1.7e-23 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo10g2208 - - adu:107458074 444.121