Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo10g2206 ATGGCTGCTGCGCGATGGAGGGAAAGTGAGAGAGCAGGCGGTGGCTGGATGGAGGTGAGGGACGACCAGGAGCTCGATGAGAAGAGCCCTGGACCGAGTGTGAGAGAGGCGTTCTGGATCTGGATTCTGGACGGGACGATGGAGTTTGGAAGTGTTGCTTTTAGTTTAAGAGGCACAATGAGATTAGAAAAGTGCTGGTTTTGTTCTTCAACCGTGTACCCTGGACATGGAATCCAGTTTGTTCGTAATGATGCAAAGGTGAACCTCTGTTCTTCCCTATGGATCTCTCATTTATCTTATCGATCTAAATGCCACAAGAACTTCAAAATGAAGAGGAATCCTCGGAAAGTAAAATGGACCAAGGCGTATAGGCGGGTGCATGGAAAGGATATGACTCAGGATTCAACCTTTGAGTTTGAGAGAAAGCCAAATAGGCTAGAGAGATATGACAGGAATCTTGCGGAAAACATCCTCAAGGCCATTCCAAAGATTGAAAAGATCAGGGTCATCAGGGAGGAGAGGCACCATAAGAATAGAATGAAGGGCAAGAAAGAAAAGATACAGGAGGAGGCAGTAAAGGAGTTGGAGCAGGGCATCAGTATGGTCAAAGCTCCTTTGGCCCTTCAGAAGGACCCATCTCTTACATTATCACAAAATAGGGTGTTCATGGTTTGGTTAATCCAAAAATCAAATCAATTTTTTGGTTAA 708 0.4534 MAAARWRESERAGGGWMEVRDDQELDEKSPGPSVREAFWIWILDGTMEFGSVAFSLRGTMRLEKCWFCSSTVYPGHGIQFVRNDAKVNLCSSLWISHLSYRSKCHKNFKMKRNPRKVKWTKAYRRVHGKDMTQDSTFEFERKPNRLERYDRNLAENILKAIPKIEKIRVIREERHHKNRMKGKKEKIQEEAVKELEQGISMVKAPLALQKDPSLTLSQNRVFMVWLIQKSNQFFG* 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo10g2206 235 PANTHER BNAA04G10330D PROTEIN 60 212 - -
Amo10g2206 235 CDD Ribosomal_L24e_L24 60 122 IPR000988 -
Amo10g2206 235 Gene3D Ribosomal protein L24e 60 136 IPR038630 -
Amo10g2206 235 Coils Coil 170 197 - -
Amo10g2206 235 Pfam Ribosomal protein L24e 60 133 IPR000988 -
Amo10g2206 235 ProSitePatterns Ribosomal protein L24e signature. 67 84 IPR023442 -
Amo10g2206 235 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 63 124 - -
Amo10g2206 235 PANTHER 60S RIBOSOMAL PROTEIN L24 60 212 IPR000988 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo10g2206 Amo-Chr10 77283690 77285905 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo10g2206 60 207 Cytoplasmic Ribosomal Protein Gene Family AT2G44860 66.443 7.13e-66 199
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo10g2206 K02896 - gmx:100778077 268.085