LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Amo10g2157	ATGTGCCAAGTCGCATTTAGTCTGTTGATATCTCGATTGCAAACATATTGTCGGGAGCCATATGTGTCGTTATTAGAGAAAGAACTGGACAGGTATTATAACAATTCGATGTATGCACCATTCGAAGAAGAAGGGGTCGTCGAGGAGAATGCAGCGAGCGATGGAGATGATTTCGAGGGGGTTGGGGGACATTCGGCTGAGTCAGACCGGGAAGTTGCTTTTGCTTTCTATAACCTATATGCAAAGATGAACGGGTTTGCCGCAAGAAGGGAACCAAAGCCAGAGACTAGATGTGGTTGTGAGGCTGAGATGCGTGTACATGTACACAGGGAAAGTGGAAGATGGATCATAATCTATTTTCAGGAAGTTCATAATCACAAGATGCTTGAGGACACACTAACTTTTATGCTTCCCGGACACAGGATGATGAACGCGGCAGCTATTAATCAGATGAATATGATGCTTAAGTGGGTGTGTGATCTTTATGCCAAGAGAGCAATGTGGGCCACTACATATATCCGCGGACATTTTTTCGGTGGCTTCCGAACAACCTCAAGGTGTGAAGGTTTACATTCTATGCTTGGCAAGTCTCGGGAAGCACACACTGATTTGCAATCTATTGTTGGGGATTTGGTAATGCAGACACCATTGCATGCTCTTGAGAGATCGGCTGCAAATTCACTTACACGGGAAATTTTTCTATTGTTCAGGCCAATGCTTTCACGAGCTTGCACGTTGAAGGTTCGCTCCTGCACATACACACCTATGGAGCTGTGTGTGGTAGCGTCCAACGATGCTGATCAGTTTGTGCAAGTCACCCAGAAAATTAGGAATGAGATCTCCCGTGTTAAGGGTTCAGTCAAAGAGGTTGGCGAAAGAGCGAATGTGGTCGGATCCTCCACTCTGGAGGAATGTGTTAGGGATCCGAATATTGCCCGACAACGTACTAGGCGCAGAAAAGGTTCACTAAACCATCCATCAGTCAAGGGTGTCAAGAGGTGTGGCATTTGTAGGAAGGTTGGACATAATAGACTTTCATGCCATCAAAGGCAAACTAGGCGTGAGTCTGAGTCTTTGGCAGCAAGATGTAGCCCAAGCGGTGAGATGTACGACGATGATGACGTATACTATGAAGACATATCCCATGTTAGTCTCATATGA	1161	0.4574	MCQVAFSLLISRLQTYCREPYVSLLEKELDRYYNNSMYAPFEEEGVVEENAASDGDDFEGVGGHSAESDREVAFAFYNLYAKMNGFAARREPKPETRCGCEAEMRVHVHRESGRWIIIYFQEVHNHKMLEDTLTFMLPGHRMMNAAAINQMNMMLKWVCDLYAKRAMWATTYIRGHFFGGFRTTSRCEGLHSMLGKSREAHTDLQSIVGDLVMQTPLHALERSAANSLTREIFLLFRPMLSRACTLKVRSCTYTPMELCVVASNDADQFVQVTQKIRNEISRVKGSVKEVGERANVVGSSTLEECVRDPNIARQRTRRRKGSLNHPSVKGVKRCGICRKVGHNRLSCHQRQTRRESESLAARCSPSGEMYDDDDVYYEDISHVSLI*	387

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Amo10g2157	386	Pfam	FAR1 DNA-binding domain	90	129	IPR004330	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Amo10g2157	Amo-Chr10	76180816	76184908	Transposed

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	FAR1	Amo10g2157		FAR1	1.4e-07	CL0274

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Amo10g2157	-		-	ahf:112717731	244.973