Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo10g2132 ATGGATCGGAAGTTTGGGGTATTTGAAAAGTGTATTGCAGTCATGGAGGCAGGGGAAGGCACTGTGCAAGAAAATGGAAATAGTCCGACAACTGTAGTTGACAATGTTGGGGGCATTTCAGATGCATTTGATTGGCTCAGTCAGACGGTGGATAGTGGTGGCTATTCAGAGGACGTGACATTAGACATGGGAATGGAATATGCTGAGACAACTGGTGTAGCATTGAAGCAGACGCAGGAAAATGGCAACATGTCTGTTGAAGGAATTTCTTTAACTGCCGATGATATTATACAGATAGAGTTTAGTGATCCTAAGCAGGCTGCACATTTGTACGAGGAGTACAGCCGTGTGAGAGGTTTTGGTATCCGACAAGGGAAGAAAATAAGAAACAAGAAAGGTGAATTTGTGCAATTCACTTATCTGTGCAACCGCGAAGGCTTTAGAGATAAAAAATGGCTTCAGATGCATCATCGTAAAAGGGAGCTTAAGGTTGTTACTAGGTGTGGGTGTCCAGCTGAGATGCGGATAAAATCAAGAGATAGCACCGGAAAATGGTACGTGTCACGTTTTGTGGACAATCACAACCATGATCTTCTACCTGCCAAAGACAATGAGGACGAGCTCGAGTTTCGTTCATCGTATGGCACCCCAGTCATTCAGACTCAGTTTCCAGAGTTAGAAAAGTCAGACATTACTTCGCTTCCCAATAGTCTGGTGCTGCCGCGGTGGTCCAAGATAGCGAGAATGGATTTGTGCCGGGATAGGCATGGGTTGCAATGTCAAGCTACAAGCATGCATTTTGTACCCTGGAAAGGGGGAGTAAACGACCCGATAAGCATAAGGACGAAGGGAACCGGCAGAGGCAATGAACCTGTAGGGTCTAGAGGCATTAAGCGAAGGAGATGCAGCACCTGCGGCGTTCTCGGGCATCGTAGGACGCGATGTCCGAATGGGCCCACACCATCGCAGCAATGTGGTCAGGAGCCGGATATGCATCCTTCAACAAAGACATTTGAACCACATTAG 1026 0.4688 MDRKFGVFEKCIAVMEAGEGTVQENGNSPTTVVDNVGGISDAFDWLSQTVDSGGYSEDVTLDMGMEYAETTGVALKQTQENGNMSVEGISLTADDIIQIEFSDPKQAAHLYEEYSRVRGFGIRQGKKIRNKKGEFVQFTYLCNREGFRDKKWLQMHHRKRELKVVTRCGCPAEMRIKSRDSTGKWYVSRFVDNHNHDLLPAKDNEDELEFRSSYGTPVIQTQFPELEKSDITSLPNSLVLPRWSKIARMDLCRDRHGLQCQATSMHFVPWKGGVNDPISIRTKGTGRGNEPVGSRGIKRRRCSTCGVLGHRRTRCPNGPTPSQQCGQEPDMHPSTKTFEPH* 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo10g2132 341 Pfam FAR1 DNA-binding domain 110 200 IPR004330 -
Amo10g2132 341 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN 68 312 - -
Amo10g2132 341 MobiDBLite consensus disorder prediction 316 331 - -
Amo10g2132 341 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 68 312 - -
Amo10g2132 341 MobiDBLite consensus disorder prediction 312 341 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo10g2132 Amo-Chr10 75570737 75576341 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Amo10g2132 FAR1 1.7e-20 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo10g2132 - - adu:110274949 238.424