Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo10g2105 ATGTTTGTATGTATTATAAATGAGCAGAACATAAATATTTTTAAAAAAAAAATTCAATTTGATTTTGAATTCTTCAATGTTATATTTGGGTCTAGGAGTCATGGTTTTCTTATTTTGCTATTTCCATGTAAAACTTTCAGATATGTGCAAATTCTCCACCCAAAACCCTTTCCTTATTTTCTGGCTGTGACCCTTCATTTAAGGCTCTGCCTTCTATTCAAAGGCATTCCTCTTCTTTACCCTAAGAATGCACTAAACATGTTCTATGATTTTCTTGGGGTTGGAGCACAGTTTGCATCCAATGTTGGCATGTGTTTTGGAACCATTGAAGATGCAAATCAATTTTATCAGAATTATGCCAAGCGCATTGGTTTTGTTACTAAGATAAGGTTTACCCGAAGAGTTGGTAAAGATAAGGTTCCTAAGAATCAAATGATCACTTGCAATAGGGAGGGGAAACGCAAGTCTAGAGTTTCACCAATAGAAAAGACCAACCCTAGAACCAACTACAATTGCCCCGCAAGAATTTCTATTAGGTTGAATAAGGAGGTCATTGAGAGGAATGATGAAGCAGGTGTGAGACCAAGCAAAACATATCAAGTATTGGTGGATATCTATGAAGAAAGACATCGATGGGTTCCAATTTTTCTTGACAACTTTTTTTGGGCTGGTATGAGATCCACACAACGAAGTGAGAGCATGCATTCATATTTTGACAAATTTATAAATAACAAGAGCTTGTTGATTCAGTTTGTCAAACAATATGACAATTGCCTTGGATGGAAAGAGCAACAAGAAAGGGAGGTTGATGTTGAAGACTACAAATCAATAATACCTTGTGCCACTAATTCCTTACTAGAGAAGCAATTTCAAGGTGCCTATACTAATGCAAAGTTTAAGGAAGTACAAAAGCAATTTAGAAAGAAAGCAAATTGTATTTTGCACCTTATGAAAGCAGTTTCTACATCTAAAATCTATTCTATTTTGGAGGACGTATCTACTTCTAAAGAGAGGGTTTATGAAGTTAACTACAATGCAGAAACAAAGGATATTACATGCATGTGTCAAATGTTTGAATCAAGAGGCATATTATGCCGTCATAGCTTGGTTGTCCTAGGGCCTGAATGCGTGAGAGAAATTCCAAGAAGATACATTTTGGACCGTTGGAGCAAACTTGTGAAGCGAAGACATAGTGATATTAAGAGCAGCCATGATCCAAGTTTGTTGAATATAAAAACAGAGAGGTTTGATGATTTATGCTCCCATTCGAACAGTGTTGCTCAATTTGCATCCCAAACAAAGGAAACAAGTGATATCTTACATCGTTATCTTGATATGGCTATGGCGGAGTGTCAAAAGCATGTTGCTAACTCATCATCTAATGCCAATGAGTTAGATAATTTGCTTACATTAGAAGATGGTGGTAAAGATGGTGGTAAAGATGTAATGTCCATTTTTGTAGGAGGCTGTATAATAAGCATTCAAGATATTAAAAGCCCTCCTTATGTGTCCACTAAGGGTCGTCCAACAAATAGGCTAGGATCTGAAAAAGACAAGATGATAAAAAAGAAGACCGAGGCAAAGAAGAGGAAAAGTGAGATAACTGAAAAAGAGGATAATCAACATATTGGAGATAGTCAAAGTCTCCCTTTCAACGAACAGCTTCAAGATGCTAACTACAATGTTAATGAGGGATTTGAATCCGATTCAATGGGAGGATCAATGGGAGAATTCATGTCCTTATTGAACTCAATCCATTCATACCAATTCTCAAATGTCGATTGA 1785 0.3625 MFVCIINEQNINIFKKKIQFDFEFFNVIFGSRSHGFLILLFPCKTFRYVQILHPKPFPYFLAVTLHLRLCLLFKGIPLLYPKNALNMFYDFLGVGAQFASNVGMCFGTIEDANQFYQNYAKRIGFVTKIRFTRRVGKDKVPKNQMITCNREGKRKSRVSPIEKTNPRTNYNCPARISIRLNKEVIERNDEAGVRPSKTYQVLVDIYEERHRWVPIFLDNFFWAGMRSTQRSESMHSYFDKFINNKSLLIQFVKQYDNCLGWKEQQEREVDVEDYKSIIPCATNSLLEKQFQGAYTNAKFKEVQKQFRKKANCILHLMKAVSTSKIYSILEDVSTSKERVYEVNYNAETKDITCMCQMFESRGILCRHSLVVLGPECVREIPRRYILDRWSKLVKRRHSDIKSSHDPSLLNIKTERFDDLCSHSNSVAQFASQTKETSDILHRYLDMAMAECQKHVANSSSNANELDNLLTLEDGGKDGGKDVMSIFVGGCIISIQDIKSPPYVSTKGRPTNRLGSEKDKMIKKKTEAKKRKSEITEKEDNQHIGDSQSLPFNEQLQDANYNVNEGFESDSMGGSMGEFMSLLNSIHSYQFSNVD* 595
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo10g2105 594 MobiDBLite consensus disorder prediction 523 543 - -
Amo10g2105 594 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 100 180 IPR031052 GO:0006355
Amo10g2105 594 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 200 457 IPR031052 GO:0006355
Amo10g2105 594 SMART 26again6 351 378 IPR006564 GO:0008270
Amo10g2105 594 ProSiteProfiles Zinc finger SWIM-type profile. 340 376 IPR007527 GO:0008270
Amo10g2105 594 PANTHER OS03G0843700 PROTEIN 100 180 - -
Amo10g2105 594 PANTHER OS03G0843700 PROTEIN 200 457 - -
Amo10g2105 594 Coils Coil 517 537 - -
Amo10g2105 594 Pfam FAR1 DNA-binding domain 114 182 IPR004330 -
Amo10g2105 594 Pfam SWIM zinc finger 340 372 IPR007527 GO:0008270
Amo10g2105 594 MobiDBLite consensus disorder prediction 523 549 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo10g2105 Amo-Chr10 75104618 75110095 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Amo10g2105 FAR1 6e-10 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo10g2105 - - ahf:112717726 739.954