Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo10g2092 ATGCCCACTTGGTGGAGTAAAAAGTCCAGCAAGTCCAAGCAGCAGCAAGAACTGCAGCAGCCACATCAGCATGGAGGAGGAGGAGTTCGTCAATTCACCTTCACCAGATCAAACAACAACGTTTCTTCTTCTCTTTCACCTCCCAGTAAGGCCAAATCCGACAAGCCCAATCACAGCTTCGACGAAACCCTCTCCCGCAACTCACCAAGGGTCAGCAGAGACTTCTCTTCTACCCCCGCCGTAGCTTCCTCCGCCGCCGCCGCCGCCGCCGCCGCCGGAGGCTCATCCTCCGGATTCTCATGCTTCGATTCCGACGGCGACAAGAGAGGCCACCCCTTGCCTCGCCCCTCTGTCTCCTCCACCCAAAGCTTCGGCAACGACCAAGGCCTTGTATTCGGATCTGCCTCCGTCTCTGGTTCCAGCGTTAGTTCCACGGGCTCCGTTGATGATCAACAACCCACCTCTCGATACACTCGTATAGATGCAACCAGAGGACAAAGTGACATAAAGTTCAATGCAAGGTCAAAAAGCCCGGGTCCTGGTTCAAGAGGGCCCACCAGCCCTACATCACCGCTTCATCCGAGGTTGCATGTTTTGAGTCTTGACTCCCCTACATGCAGGCAAGAAGATGGAAAGAGTGAGTGTCATCCGTTGCCTCTTCCGCCGGGTTCTCCAACTAGTCCTTCTTCTCTTTCCAATTCCAACACAAAACCAAATGGACTTCCAGAAAACACCACATGTAATCCATCCAAGTGGAAGAAAGGAAAGCTGCTAGGACGGGGTACATTTGGGCATGTATATGCTGGATTCAATAGTGAAAATGGACAAATGTGTGCAATAAAAGAAGTCAGGGTTGTTTGTGATGATCAAACATCAAAAGAGTGCTACAAACAACTTAATCAGGAGATACTCTTGCTTAGTCAGCTTTCACATCCGAATATTGTTCAATACTATGGGAGTGACTTGGGAGAAGAAACACTTTCAGTTTATTTAGAATATGTTTCCGGTGGTTCGATTCATAAATTACTTCAGGAATATGGGGCCTTTAAGGAGCCTGTTATTCAAAATTATACTAGGCAGATTGTCTCTGGACTTGCCTATCTTCATGGTAGAAATACAGTGCACAGGGATATCAAGGGGGCTAACATACTAGTTGATCCAAATGGTGAAATCAAGCTGGCAGACTTTGGAATGGCTAAACATATAAATGCTTCTTCCTCAATGCTTTCTTTCAAAGGAAGTCCATACTGGATGGCCCCTGAGGTTGTAATGAATACAAATGGCTATAGTCTTCCTGTTGATATATGGAGCTTGGGATGCACAATTCTTGAAATGGCAACATCGAAGCCTCCTTGGAGTCAATATGAAGGGGTAGCAGCAATATTCAAAATTGGTAACAGCAAAGATATGCCTGAACTTCCTGAGCATCTATCGAATGAGGCAAAGAACTTCATCCAGTTATGCTTACAAAGAGATCCATTGGCTCGCCCAACAGCTCAAATGCTGCTAGATCACCCATTTATTCGAGATCAGTCGGCAACAAGAGCTGCAAATGTCAGCATAACCAGGAGTGCTTTCCCCTATATGCTTGATGGGAGCCGGACACCGCCACCTGAGATTTTTTCAAATAAAACGAATGCAACTTCATTTGATGGAGACTATGCAACAAGGGCAGCCCCTCCAGCCTCGCGGGCTGTAAGGAACCAAAGAGATAACTCAAGAATGATCACATCATTACCCGTATCTCCTTGTTCAAGTCCATTGCGGCAGTATGGATCAGCACACAAGAGCTGTTTCCTTTCACCTCCTCATCCAACTTGCACATTGATGGGACAAAATACCCTCCCGTCATATCCGTTGAGATCGAATGCCGCCTTCACTCTTGATCCTTGGCACGAAACATCTCCATACAGATCCCACCACACACCTGGTGGATCCCCAAGATCGAGACTCATTTGA 1959 0.4727 MPTWWSKKSSKSKQQQELQQPHQHGGGGVRQFTFTRSNNNVSSSLSPPSKAKSDKPNHSFDETLSRNSPRVSRDFSSTPAVASSAAAAAAAAGGSSSGFSCFDSDGDKRGHPLPRPSVSSTQSFGNDQGLVFGSASVSGSSVSSTGSVDDQQPTSRYTRIDATRGQSDIKFNARSKSPGPGSRGPTSPTSPLHPRLHVLSLDSPTCRQEDGKSECHPLPLPPGSPTSPSSLSNSNTKPNGLPENTTCNPSKWKKGKLLGRGTFGHVYAGFNSENGQMCAIKEVRVVCDDQTSKECYKQLNQEILLLSQLSHPNIVQYYGSDLGEETLSVYLEYVSGGSIHKLLQEYGAFKEPVIQNYTRQIVSGLAYLHGRNTVHRDIKGANILVDPNGEIKLADFGMAKHINASSSMLSFKGSPYWMAPEVVMNTNGYSLPVDIWSLGCTILEMATSKPPWSQYEGVAAIFKIGNSKDMPELPEHLSNEAKNFIQLCLQRDPLARPTAQMLLDHPFIRDQSATRAANVSITRSAFPYMLDGSRTPPPEIFSNKTNATSFDGDYATRAAPPASRAVRNQRDNSRMITSLPVSPCSSPLRQYGSAHKSCFLSPPHPTCTLMGQNTLPSYPLRSNAAFTLDPWHETSPYRSHHTPGGSPRSRLI* 653
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo10g2092 652 SUPERFAMILY Protein kinase-like (PK-like) 250 593 IPR011009 -
Amo10g2092 652 MobiDBLite consensus disorder prediction 30 53 - -
Amo10g2092 652 MobiDBLite consensus disorder prediction 62 83 - -
Amo10g2092 652 PANTHER MAP KINASE KINASE KINASE 1 633 - -
Amo10g2092 652 MobiDBLite consensus disorder prediction 1 22 - -
Amo10g2092 652 MobiDBLite consensus disorder prediction 115 162 - -
Amo10g2092 652 MobiDBLite consensus disorder prediction 168 189 - -
Amo10g2092 652 ProSitePatterns Protein kinases ATP-binding region signature. 258 281 IPR017441 GO:0005524
Amo10g2092 652 MobiDBLite consensus disorder prediction 1 251 - -
Amo10g2092 652 ProSiteProfiles Protein kinase domain profile. 252 508 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo10g2092 652 Gene3D Transferase(Phosphotransferase) domain 1 249 528 - -
Amo10g2092 652 Pfam Protein kinase domain 253 508 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo10g2092 652 MobiDBLite consensus disorder prediction 227 251 - -
Amo10g2092 652 CDD STKc_MEKK1_plant 251 508 - -
Amo10g2092 652 SMART serkin_6 252 508 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo10g2092 652 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 1 633 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo10g2092 Amo-Chr10 74876034 74882153 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo10g2092 1 570 MAP Kinase Kinase Kinase AT1G53570 55.973 0.0 546
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Amo10g2092 Pkinase 6.7e-73 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo10g2092 K04421 - gmx:100813122 889.412
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo03g2822 03 118891158 118896090 Amo10g2092 10 74876034 74882153 PCT
Amo10g2092 10 74876034 74882153 Amo03g2822 03 118891158 118896090 PCT