Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo10g2087 ATGGAACAGATACTATTGACACTAAAAGAATCCTTTTTGAAGGCTTCTAAGATTATGGATAAGGAACTGAAACTGCATCCTGATATTGATTGCTTTTGTAGCGGGACTATAGCTGTTACCTTGGTTAAGCAGGGCAAGGACCTTGTTATTGGAAATGTTGGGGACTCCAGAGCTATATTGCGTACCCGAGATCATGATAATAATCTTATTGTTGTTCAATTGACAATTGACCTCAAGCCAAATCTTCCAATTAGTTGA 258 0.3798 MEQILLTLKESFLKASKIMDKELKLHPDIDCFCSGTIAVTLVKQGKDLVIGNVGDSRAILRTRDHDNNLIVVQLTIDLKPNLPIS* 86
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo10g2087 85 SUPERFAMILY PP2C-like 7 83 IPR036457 -
Amo10g2087 85 Pfam Protein phosphatase 2C 8 82 IPR001932 -
Amo10g2087 85 Gene3D - 1 84 IPR036457 -
Amo10g2087 85 PANTHER ALPHABET, ISOFORM E-RELATED 3 83 - -
Amo10g2087 85 ProSiteProfiles PPM-type phosphatase domain profile. 1 85 IPR001932 -
Amo10g2087 85 PANTHER PROTEIN PHOSPHATASE 2C 33-RELATED 3 83 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo10g2087 Amo-Chr10 74724887 74726017 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo10g2087 3 83 PP2C-type Phosphatase Gene Family AT3G02750 69.136 5.89e-37 127
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo10g2087 - - gmx:100802479 140.198