Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo10g2066 ATGATGAGTTCATCAGCAAGAAAGGAAGAAGGATATGATGACGACGATGCATGCATGTATGCGATGTTGTTGTCAACTTTTCAAGTTTCCGAAATCGCCTCAAAGCTTCCTTCACAGCACCCTCAACTCCACAACAGGCTGGAGAGAATGCTTCGTGTGCTTGCCAGTTTCTCACTTCTCAATTCGAGTGTCGTCGTTGACCATGGCGTTGGCGGCAAGGTTGAGAGGCTTTATAGTCTCTAA 243 0.465 MMSSSARKEEGYDDDDACMYAMLLSTFQVSEIASKLPSQHPQLHNRLERMLRVLASFSLLNSSVVVDHGVGGKVERLYSL* 81
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo10g2066 80 Pfam Dimerisation domain 29 55 IPR012967 GO:0046983
Amo10g2066 80 PANTHER O-METHYLTRANSFERASE 21 80 IPR016461 GO:0008168
Amo10g2066 80 Gene3D - 25 80 IPR036388 -
Amo10g2066 80 PANTHER CAFFEIC ACID O-METHYLTRANSFERASE 21 80 - -
Amo10g2066 80 SUPERFAMILY "Winged helix" DNA-binding domain 26 80 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo10g2066 Amo-Chr10 74443703 74444032 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo10g2066 14 80 Monolignol Biosynthesis Gene Families AT5G54160 33.333 5.20e-07 43.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo10g2066 K13066 - ahf:112717717 145.591