Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo10g2063 ATGAGTCTCCAGATGGAATGCTTTATATCAAAACCACAGTTTATGCAAATTGTAGCTGCAACTTCAGCTAATAGAGCATCACCAATGGCACCACTAGGCATAGAAGTTGGGCAGCCCAATGACAGTTTGTTGCCTTCAAAGGAGGGAACGGCATTGCCATTGGATAAATCTTTCCAAACACTAGAGTTTGATAATAAAATGCCAAATGGAAAGCCGAAGAATAAGGTTGTTCGTCCTGAGAGTCCTATACTTGATATTGCTGCTGCTCTTGACAGAAGCAAGCTGAGAAAAGTTTCAGAACATGTTATTTCTCCAAAACCACCCAAGTTAGATGAAAGAGATTCATTGTTAGAGCAAATAAGATCAAAGTCCTTCAACTTGAGACCTGCTGCAGCTACACAACCCATCATTAGGGCCCTAAAAATTTTATATAATCTAATCATTAAAATTGATGTAGGTTGCATTGGAGAATTTAAGTATGTTGATGACCATAGGGCTGGAAAAATCATTGTCGAATTGAACAGCAGGCTTAACAAGTGTGGTGTAATCAGTCCCCGATTCAATATCGGCGTTAAAGAGATCGAAAGTTGGACTGTTAGACTCCTCCCCTCAAGACAGGTCAGCAATGTTTCCATAGTTTTGTGTTTGCATATTGTGATATTGTGCAAGACTTATGAATGTGTTTCCATAGTTTTGTGTTTGCATATTGTGATGTATTTTTGTTTTTGA 729 0.3855 MSLQMECFISKPQFMQIVAATSANRASPMAPLGIEVGQPNDSLLPSKEGTALPLDKSFQTLEFDNKMPNGKPKNKVVRPESPILDIAAALDRSKLRKVSEHVISPKPPKLDERDSLLEQIRSKSFNLRPAAATQPIIRALKILYNLIIKIDVGCIGEFKYVDDHRAGKIIVELNSRLNKCGVISPRFNIGVKEIESWTVRLLPSRQVSNVSIVLCLHIVILCKTYECVSIVLCLHIVMYFCF* 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo10g2063 242 ProSiteProfiles WH2 domain profile. 112 130 IPR003124 GO:0003779
Amo10g2063 242 SUPERFAMILY Ribosomal protein S8 150 207 IPR035987 GO:0003735|GO:0005840|GO:0006412
Amo10g2063 242 Gene3D - 178 214 - -
Amo10g2063 242 PANTHER WASP-1 22 138 IPR028288 GO:0005856|GO:0030036
Amo10g2063 242 Gene3D - 117 177 - -
Amo10g2063 242 PANTHER WH2 DOMAIN, SCAR/WAVE FAMILY PROTEIN-RELATED 22 138 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo10g2063 Amo-Chr10 74375720 74378077 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo10g2063 113 219 Cytoplasmic Ribosomal Protein Gene Family AT5G59850 51.376 1.05e-30 108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo10g2063 - K02957 adu:110276602 227.254