Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo10g2049 ATGATTGTTTTAACTTTCTATTGGAGGAAAAAAAAGCTTAGAGGAAATATACCACAAGAAAAAGAAGTTGATGAAGCCCATGAAGAAAAACTTGAGCTTCCATTCTTCGATTTTACCACAATAGTTCATGCCACTAATAACTTCTCAAGTGACAAGAGGCTTGGCCAAGGTGGTTTTGGGCACGGTACATTAATTGATGGGCAAGAGGTTGCTGTCAAAAGATTGGCGCATAAGTCTGGACAAGGAGTAARAGAATTTAAGAATGAAGTTATATTATGTKCCAAACTTCAACACCGCAATCTTGCTAAGGTTCTTGGTTGTTGCATCCAAGGAGAAGAAAGAATATTAATCTATGAGTATATGCCCAATAAAAGTTTAGATTCCTTTCTTTTTGATTCTTCTCGAGAACTTCTTGATTGGATGAAACGATTTAACATCATATTTGGAATTGCTCGTGGACTTCTTTATCTTCACCAAGATTCAAGATTGAGAATTATACACAGAGATCTTAAAACAAGTAATATTTTATTAGACAATGAATTGAACCCAAAAATTTTAGATTTTGGAGTGGTACGAATGTTTACTGAAAATCAAATGGAAGCGAATACAAAAATAATTGCAGGAACATATGGCTATATGGCACCAGAATATGCAATAGAAGGGATATTTTCTACCAAATCTGATGTTTTCAGCTTTGGAATAATATTATTAGAGATAGTAAGTGGACGGAAAAACACAGGAATTTTTTATCCTAATCAAGGGTTCAATCTTCTAGGACATGCATGGAGATTATGGAAAGAAGAAAATCCAATAAAACTAGTAGATGCTTGTTTGGAAGACACTTTTACAATTTCAGAGGTTCTACGTTGCATACACATTGGTCTTTTATGTGTGCAATTGCATCCTGATGATAGACCAAACATGGCATAA 930 0.3419 MIVLTFYWRKKKLRGNIPQEKEVDEAHEEKLELPFFDFTTIVHATNNFSSDKRLGQGGFGHGTLIDGQEVAVKRLAHKSGQGVXEFKNEVILCXKLQHRNLAKVLGCCIQGEERILIYEYMPNKSLDSFLFDSSRELLDWMKRFNIIFGIARGLLYLHQDSRLRIIHRDLKTSNILLDNELNPKILDFGVVRMFTENQMEANTKIIAGTYGYMAPEYAIEGIFSTKSDVFSFGIILLEIVSGRKNTGIFYPNQGFNLLGHAWRLWKEENPIKLVDACLEDTFTISEVLRCIHIGLLCVQLHPDDRPNMA* 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo10g2049 309 ProSitePatterns Serine/Threonine protein kinases active-site signature. 165 177 IPR008271 GO:0004672|GO:0006468
Amo10g2049 309 Gene3D Phosphorylase Kinase; domain 1 21 120 - -
Amo10g2049 309 SMART serkin_6 48 291 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo10g2049 309 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 17 309 - -
Amo10g2049 309 ProSiteProfiles Protein kinase domain profile. 48 309 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo10g2049 309 SUPERFAMILY Protein kinase-like (PK-like) 30 308 IPR011009 -
Amo10g2049 309 Gene3D Transferase(Phosphotransferase) domain 1 121 309 - -
Amo10g2049 309 Pfam Protein tyrosine and serine/threonine kinase 51 247 IPR001245 GO:0004672|GO:0006468
Amo10g2049 309 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 17 309 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo10g2049 Amo-Chr10 73791293 73793019 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo10g2049 36 306 Receptor kinase-like Gene Family AT4G11530 59.058 2.81e-115 345
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Amo10g2049 PK_Tyr_Ser-Thr 1.3e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo10g2049 - - adu:107478358 595.504