Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo10g2044 ATGGTGTCGAACACTGCTGGAAAGGTCATACGCTGCAAAGCTGCGGTGGCTTGGGAAGCTGGAAAGCCACTGGTGATACAGGAAGTGGAGGTAGCCCCGCCACAGGCAGATGAGGTCCGTATCAAGATATTGTTCACCTCACTCTGCCACACTGATGTCTACTTCTGGGAAGCTAAGGGACAGACACCGGTGTTTCCTCGTATTCTTGGTCATGAAGCCGGCGGCATTGTTGAGAGTGTTGGTGAGGGCGTGACTGATCTCAAGCCGGGAGATCATGTTCTTCCGGTGTTCACAGGGGAGTGCAAGGAGTGTCAGCATTGCAAATCAGAGGAAAGTAACATGTGTGATCTCTTAAGGATCAACACGGACCGTGGAGTGATGATCAGTGATGGAAAGTCAAGATTCTCAATCAACGGAAAGCCAATTTACCATTTTGTTGGAACCTCCACATTCAGTGAATACACTGTTGTTCATGTTGGCTGTCTTGGTGCTACTTTGAATGTTGCAAAACCAACCAAAGGTTCATCAGTGGCTATATTCGGATTGGGAGCTGTGGGGCTAGCTACTAGCCGGTGCATCCAGGATATTGGGGTTGACTTGAATTCTAAGAGATTTACTGAAGCTAAGAAGTTCGGAGTTACTGAGTTTGTGAATCCAAAAGATTATGACAAGCCTGTTCAAGAGGTTTGGATTGCTGAAATGACTAATGGTGGTGTCGATCGGAGTGTTGAGTGTACCGGAAGTCTCAGTGCTATGATCTCTGCATTCGAATGCGTCCATGATGGATGGGGTGTTGCTGTGCTTGTTGGTGTGCCGAACAAAGATGATGCTTTCAAAACACATCCAATCAATCTCTTGAATGAGAGGACTCTAAAGGGTACATTCTTTGGTAACTATAAGCCACGTTCTGATCTCCCATCAGTGGTGGAAATGTACATGAACAAGGAACTTGAACTGGAGAAGTTTATCACACATGAAGTGCCATTCTCAGAAATCAACAAGGCCTTTGAATACATGCTTAAGGGAGAGAGCCTCCGTTGTATTATCCGCATGCCTGCATAA 1062 0.4633 MVSNTAGKVIRCKAAVAWEAGKPLVIQEVEVAPPQADEVRIKILFTSLCHTDVYFWEAKGQTPVFPRILGHEAGGIVESVGEGVTDLKPGDHVLPVFTGECKECQHCKSEESNMCDLLRINTDRGVMISDGKSRFSINGKPIYHFVGTSTFSEYTVVHVGCLGATLNVAKPTKGSSVAIFGLGAVGLATSRCIQDIGVDLNSKRFTEAKKFGVTEFVNPKDYDKPVQEVWIAEMTNGGVDRSVECTGSLSAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPINLLNERTLKGTFFGNYKPRSDLPSVVEMYMNKELELEKFITHEVPFSEINKAFEYMLKGESLRCIIRMPA* 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo10g2044 353 PANTHER ALCOHOL DEHYDROGENASE 1 4 161 - -
Amo10g2044 353 SUPERFAMILY GroES-like 5 162 IPR011032 -
Amo10g2044 353 Pfam Alcohol dehydrogenase GroES-like domain 37 158 IPR013154 -
Amo10g2044 353 PANTHER ALCOHOL DEHYDROGENASE 4 161 - -
Amo10g2044 353 Pfam Zinc-binding dehydrogenase 181 309 IPR013149 -
Amo10g2044 353 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 70 84 IPR002328 GO:0008270|GO:0016491
Amo10g2044 353 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 160 342 IPR036291 -
Amo10g2044 353 PANTHER ALCOHOL DEHYDROGENASE 162 351 - -
Amo10g2044 353 Gene3D - 17 347 - -
Amo10g2044 353 Gene3D - 162 294 - -
Amo10g2044 353 SUPERFAMILY GroES-like 301 350 IPR011032 -
Amo10g2044 353 CDD alcohol_DH_plants 10 350 - -
Amo10g2044 353 PANTHER ALCOHOL DEHYDROGENASE 1 162 351 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo10g2044 Amo-Chr10 73572775 73576115 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo10g2044 37 135 Monolignol Biosynthesis Gene Families AT4G39330 33.000 1.35e-11 62.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo10g2044 K18857 - gmx:100783318 647.121