Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo10g2024 ATGGTGGGAACATCAAGCTCAGACGAAGGTGCAGGGCATCCAGAGCCTCTTGATCCCGATGTGCTTGAAATTGATCCTACCGGTCGCTACATTAAGTATAAAGAAATGATCGGCAAAGGAGCTTTCAAGACTGTTTACAGGGCATTTGATGAAGTCAATGGACTCGAAGTTGCTTGGAGCCAGGTTCGGATTGATGAAGTACTACAGTCACCAGATGACTTAGAGAGGCTGTACTCGGAGGTGCATCTCTTGAGGTCATTGAAACACAATAACATAGTAAGGTTCTACAATTCTTGGATTGACGACAAACACAGGACAGTTAACATGATTACAGAGCTTTTCACCTCGGGGAGCCTCAGACAGTATTGTAAGAGACACAAGAAGATCAACATTAAGGCTATTAAGGGATGGGCAAGACAAATTTTAATGGGTTTAAGCTACCTCCATAATCACAGCCCTCCAATTATACATAGGGACCTGAAATGTGATAATATATTTATAAACGGTCACCAAGGAGAAGTGAAAATTGGAGATCTGGGATTAGCAACTCTCTTGAAAGAGGGTAATGCTAAGAGCGTAATTGGAACTCCGGAGTTTATGGCACCTGAACTGTATGATGAAAGTTACAATGAGCTAGTTGACATATATTCTTTCGGGATGTGCATGCTTGAGTTGGTGACTTCTGAGTATCCCTACAGTGAATGTAGAAACTCAGCTCAGATATTCAAGAAAGTTTCAACTGGTGTAAAGCCCTTTGGTCTTTCTAAAGTCAAAGATCCAGATGTAAAATCATTTATTGAGAAATGTCTTGTCCCTGCATCTCAAAGATTGTCAGCTAAGGAGCTTCTCATGGATCCTTTTCTCCAAGCCAATGGTTCAGTAACAAATCGTCCTCTTCCATTACCAGATATTGTTCTTCCGAAATTTGGAGCCTTTGAAAATCGTTGCCTGATGTCAGAAGGTCCTGCTAGTGCACGCATAGGATCCATTCCCATGGATCCTGGTGGTACCAATGAGCTACCAGTGACTGCTGTATTTTATAATAATAATGGTGATGATGGAACACCTTCTCCATGTGTTGAGATACGAAGGCAGAAGGGAAGTGATATTTTCTTTCTGAGAGGCGAAGAAAATGATGAGAATTCAGTGTCTTTAGTTCTCCGAATAGCTGATCAGAGTGGGCGGGCAAGGAATATCCATTTCATATTTTACCTCAGCAGTGACACAGCCATCTCAGTTTCAACGGAAATGGTTGAGCAACTTGATCTTGCTCAGCAGAATGTTAAATTCATAGCTGAGATAATTGACTTGTTATTGATGACTTTGGTTCCTGATTGGAAACCTTGTGTACCGGTTGATCATCTGGCTTCTCCAAATGTTAGATGGCCACACTCGAGCCAACAGAACAGCTCTGGGTTTTCAATGTTCAAAAATAGTTCGGAAGGTGGTAGCCAAACTGCAAATAAAAATGCAGGTACAACATTGATTTCAAGGTCAGCACAAAGAGGAAACAATGAGAATACAACTTTTCACAAGGCATGGTCTCAAGCAAGCATTGGTCTTCAAGAAGGAACAATGGCAGATGATTTGCGTTCCGAGATGTCGTATACTTCTGCAACGTCTAACTTAGCCGGCAAGAATTTGTCCATGGTTTCATTGGCTTCATTGGTGTCTGCTAACTCAGAATTTGCAGACTTGGGTCTTACTAGGACAATCGGAGGTAGTCAATCCTCGTTTGATTATGAAACTGAGGTATCACATGACATGGAAAGTGATGGTATGATGAACTCCTCCTCCACTCATCCCCCCYWTGTTTCTTCCGTGTCTGAACCTCAGGATGAGTTAAGAATAGAGTTAGCAAAGGTTGAACAGCAATACCAAGATGCAATTAAAGATTTATCAGAAAGGAGATACCTTGCCATAATGGAAACTAGGAYGAGGCTGGCGCAAAAGATGCCATTATAG 1965 0.4178 MVGTSSSDEGAGHPEPLDPDVLEIDPTGRYIKYKEMIGKGAFKTVYRAFDEVNGLEVAWSQVRIDEVLQSPDDLERLYSEVHLLRSLKHNNIVRFYNSWIDDKHRTVNMITELFTSGSLRQYCKRHKKINIKAIKGWARQILMGLSYLHNHSPPIIHRDLKCDNIFINGHQGEVKIGDLGLATLLKEGNAKSVIGTPEFMAPELYDESYNELVDIYSFGMCMLELVTSEYPYSECRNSAQIFKKVSTGVKPFGLSKVKDPDVKSFIEKCLVPASQRLSAKELLMDPFLQANGSVTNRPLPLPDIVLPKFGAFENRCLMSEGPASARIGSIPMDPGGTNELPVTAVFYNNNGDDGTPSPCVEIRRQKGSDIFFLRGEENDENSVSLVLRIADQSGRARNIHFIFYLSSDTAISVSTEMVEQLDLAQQNVKFIAEIIDLLLMTLVPDWKPCVPVDHLASPNVRWPHSSQQNSSGFSMFKNSSEGGSQTANKNAGTTLISRSAQRGNNENTTFHKAWSQASIGLQEGTMADDLRSEMSYTSATSNLAGKNLSMVSLASLVSANSEFADLGLTRTIGGSQSSFDYETEVSHDMESDGMMNSSSTHPPXVSSVSEPQDELRIELAKVEQQYQDAIKDLSERRYLAIMETRXRLAQKMPL* 655
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo10g2024 654 Pfam Protein kinase domain 33 288 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo10g2024 654 SUPERFAMILY Protein kinase-like (PK-like) 33 289 IPR011009 -
Amo10g2024 654 Gene3D - 381 446 - -
Amo10g2024 654 ProSitePatterns Serine/Threonine protein kinases active-site signature. 155 167 IPR008271 GO:0004672|GO:0006468
Amo10g2024 654 ProSiteProfiles Protein kinase domain profile. 31 288 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo10g2024 654 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 1 651 - -
Amo10g2024 654 CDD STKc_WNK 29 288 - -
Amo10g2024 654 MobiDBLite consensus disorder prediction 461 493 - -
Amo10g2024 654 Coils Coil 612 632 - -
Amo10g2024 654 SMART serkin_6 31 288 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo10g2024 654 Gene3D Phosphorylase Kinase; domain 1 17 112 - -
Amo10g2024 654 Gene3D Transferase(Phosphotransferase) domain 1 114 296 - -
Amo10g2024 654 MobiDBLite consensus disorder prediction 1 21 - -
Amo10g2024 654 MobiDBLite consensus disorder prediction 590 607 - -
Amo10g2024 654 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK6-RELATED 1 651 - -
Amo10g2024 654 MobiDBLite consensus disorder prediction 589 612 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo10g2024 Amo-Chr10 73309084 73312454 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo10g2024 131 506 MAP Kinase Kinase Kinase AT1G49160 61.702 3.43e-164 476
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Amo10g2024 Pkinase 1.3e-53 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo10g2024 K08867 - gmx:121175054 839.336
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo10g2024 10 73309084 73312454 Amo20g2518 20 118117221 118119970 hybridization