Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo10g2002 ATGCAAAACTCGAGGCAACAACAACCCTCTTCCTTCTTCTTCATTTCTTCTTATTCATTCTTTTGTTTCATTCTTCTCTTTCACACTACTTTTCTCTATGGTATTGCATTCTGTTCTACGAACAGTAATAACAACGAAGCTTCTGCTCTATTTTCTTGGCTCCATAGTTCTTCTTCACCACCACCATTGTTATTGTCCAACTGGAACATCCATGACTCAAACCCATGCAACTGGACCTGCATAACATGTTCTACACTCGGTTTTGTAACTGAGATCACCATAGAATCCACCCCTCTTGAGCTTCCACTACCTTCAAACCTTTCTTCATTCAAGTTCCTTCAGAAGCTTGTCATCTCTGATTCAAATCTCACTGGACAAATCCCTCAAGACATTGGTGACTGCACTTCACTCACTGTTCTTGACTTAAGCTCTAACAACCTTGTTGGTTCAATACCTTCCTCCATTAGAAAGCTTCACAATCTTGTCAACTTGTCCTTGAACTCTAACCAGCTTTCGGGGAAGATCCCAGTCGAGTTAAGCAACTGCATTGGACTAAAGAGTCTTCTCCTTTTTGATAACCAGCTTAGTGGGGTTATCCCAAAGGAGCTTGGAAAGTTGTCGAATCTTGAGGTTCTTAGAGCCGGAGGGAACAAGGACATAGTTGGTAAGATACCTGAACAGTTTGGAGAATGCATCAATTTAACAGTGTTGGGGCTAGCTGATACAAGAATCTCAGGCTCATTGCCAGTTTCATTGGGAAAACTAAGCAAGCTTCAAACTCTGTCAATTTACACCACAATGCTCTCAGGTGAGATTCCAAGAGAGTTAGGTAACTGTTCTGAGCTTGTTGATTTGTTCCTCTATGAGAATAGCCTCTCAGGTTCCATTCCACCTGAGCTTGGAAAGCTTCAAAATCTGCAACAGTTGTTTCTATGGCAGAATAGTCTTGTTGGTGCTATACCCGAAGACATTGGAAACTGCACAAGTTTGAGAAAAATTGACTTCTCTTTGAATTCTATATCTGGATCCATTCCTCTGTCTTTAGGAAATCTTTTGAATCTTGAAGAGTTTATGATTAGTGACAACAACGTGTCTGGCTCGATACCTTCGTCGCTCTCGAATGCAAAGAACCTTCAGCAGTTGCAAGTTGATACAAACCAGCTTTCAGGTTTGATTCCACCCGAGCTAGGCCAGTTGTCGAACCTAATGGTGTTTTTCGCTTGGCAGAACCAGCTTGAAGGTAGCATTCCATCAAGTTTAGGAAACTGCAGCACCCTGCAGGCACTGGACTTGTCTCGAAACACGCTAAACGGAAGCGTTCCGGCAAGCCTATTTTGCCTCCAGAACTTAACAAAGCTGCTTCTCATCTCAAACGACTTATCAGGATCTATACCTTCAGAGATAGGTAGCTGCAGCTCTCTTGTAAGGTTGAGGCTTGGAAACAACAGAATCACTGGTAGTATTCCCAAGACCATAGGCAGCCTCAAGAGCTTAAACTTTCTTGATCTCTCCGGGAACCAGCTTTCAGGGCCGGTTCCTGAAGAGATAGTAGGCTGCTCAGAGCTGCAAATGATAGACTTGAGTGGCAACAACTTAGAAGGACCATTGCAAAATTCTCTGTCAACACTTTATTCCCTTCAAGTATTGGATGCATCTTCCAACAAGTTTTCAGGTCCAGTGCCTGCGAGTTTGGGCCACCTTGTATCTCTAAGCAAGCTTATCTTAGGAAAGAACTTGCTTTCCGGACTGATTCCAGCGTCGCTGAGCCTATGTTCAAATCTGCAATTGCTTGATCTTAGCAGTAATCAGCTCACCGGTAGCATACCAGCCGAGCTAGTCCGGATGGAGTCACTAGAAATCGCTCTCAATCTGAGCTGCAATTTTCTCAGCGGGCAAATTCCGGCTCAGATATCTGCACTTAGCAAGCTTTCCATGTTAGACCTTTCACATAACCAGTTGGAAGGGAATTTGCAGCCTTTGGAAGAGTTAGACAATCTTGTCTCCCTTAATGTTTCGTACAACAAGTTCTCCGGTTATCTTCCGGATAACAAGCTTTTCAGGCAGTTATCGCCAAAAGACCTCGCCGGAAACCAAGGCCTGTGCACATCAGGTCAGGACTACTGCTTTGTGAAAGACTCTGGCACGGCCTTGAATGCGAACGAGGCAAAGAAGTCTCGAAGGATTAAAGTGGCTATTGGTTTACTCATAGCTCTAACTGTGATAATGATTGTTATGGGAATAACTGCTGTAATAAAAGCCAGAAGAACAATTAGAGATGATGATTCAGAGTTAGGAGAATCATGGTCATGGCAATTCATACCATTCCAGAAGCTGAATTTCACGGTTGAGCAAGTACTAAGGCGTTTGGTTGACAGGAATATAATCGGAAAGGGATGCTCCGGCGTAGTGTATCGTGCCGAGATGGACAGCGGAGAAGTGATTGCAGTGAAGAAGCTGTGGCCTACAACAGATGCAGGGGAGGTGTTAGACGAAAAGACCAGAGTTCGTGATTCTTTCTCGGCCGAGGTGAGGACTCTCGGGTCGATCCGCCACAAGAACATTGTGAGGTTCTTGGGATGCTGCTGGAACAGGAAAGCCAGATTGCTCATTTTCGATTACATGCCGAATGGGAGCTTAAGCAGTTTGCTCCATGAGAGGACTGGGACTTGTTTGGAATGGGAATTGAGGTATAGAATCTTGTTGGGTGCTGCTCAAGGAATTGCATATCTTCATCATGATTGTGTTCCGCCTATAGTTCATAGAGATATCAAAGCCAATAACATCCTCATTGGCATTCAATTTGAGCCTTATATTGCTGATTTTGGCTTGGCTAAGCTAGTTGACGACGGCGATTTCGGCAGATCTTCCAATACCGTTGCCGGTTCTTATGGATACATTGCTCCAGAATATGGCTACATGATGAAGATCACAGAGAAAAGTGATGTGTATAGCTACGGAATAGTTTTGTTAGAAGTCTTGACAGGAAAGCAACCGATCGATCCAACAATCCCGGATGGTCTACATGTTGTTGATTGGGTGAGACAGAAAAAAGGGCTTGATGTTCTTGATCCTAGGTTACTCTCTAGACCAGAATCAGAAATAGAGGAAATGACGCAAGCTTTGGGAATAGCCATGTTATGTGTAAATCCGTCCCCAGAAGAAAGGCCGACGATGAGAGACATCGCCGCGATGCTCAAGGAGATAAAGCAAGAAAGGGAGGAGTCTGCGAAATTCGACGCACTTCTAAAGGATTCGCCTGCGAATGATGGCAATAAATGTTCTTCTGGTGGAGTTATGGCAGCATCTTCGTCGGTGCCAATGATGCAACGTTTGAATTCAAAGATTAATAATAACACGAGCTTCTCTGTGTCTTCATTGCTTCATTCATCTTATAGTGCTAAGATGGGATTCTAA 3414 0.4391 MQNSRQQQPSSFFFISSYSFFCFILLFHTTFLYGIAFCSTNSNNNEASALFSWLHSSSSPPPLLLSNWNIHDSNPCNWTCITCSTLGFVTEITIESTPLELPLPSNLSSFKFLQKLVISDSNLTGQIPQDIGDCTSLTVLDLSSNNLVGSIPSSIRKLHNLVNLSLNSNQLSGKIPVELSNCIGLKSLLLFDNQLSGVIPKELGKLSNLEVLRAGGNKDIVGKIPEQFGECINLTVLGLADTRISGSLPVSLGKLSKLQTLSIYTTMLSGEIPRELGNCSELVDLFLYENSLSGSIPPELGKLQNLQQLFLWQNSLVGAIPEDIGNCTSLRKIDFSLNSISGSIPLSLGNLLNLEEFMISDNNVSGSIPSSLSNAKNLQQLQVDTNQLSGLIPPELGQLSNLMVFFAWQNQLEGSIPSSLGNCSTLQALDLSRNTLNGSVPASLFCLQNLTKLLLISNDLSGSIPSEIGSCSSLVRLRLGNNRITGSIPKTIGSLKSLNFLDLSGNQLSGPVPEEIVGCSELQMIDLSGNNLEGPLQNSLSTLYSLQVLDASSNKFSGPVPASLGHLVSLSKLILGKNLLSGLIPASLSLCSNLQLLDLSSNQLTGSIPAELVRMESLEIALNLSCNFLSGQIPAQISALSKLSMLDLSHNQLEGNLQPLEELDNLVSLNVSYNKFSGYLPDNKLFRQLSPKDLAGNQGLCTSGQDYCFVKDSGTALNANEAKKSRRIKVAIGLLIALTVIMIVMGITAVIKARRTIRDDDSELGESWSWQFIPFQKLNFTVEQVLRRLVDRNIIGKGCSGVVYRAEMDSGEVIAVKKLWPTTDAGEVLDEKTRVRDSFSAEVRTLGSIRHKNIVRFLGCCWNRKARLLIFDYMPNGSLSSLLHERTGTCLEWELRYRILLGAAQGIAYLHHDCVPPIVHRDIKANNILIGIQFEPYIADFGLAKLVDDGDFGRSSNTVAGSYGYIAPEYGYMMKITEKSDVYSYGIVLLEVLTGKQPIDPTIPDGLHVVDWVRQKKGLDVLDPRLLSRPESEIEEMTQALGIAMLCVNPSPEERPTMRDIAAMLKEIKQEREESAKFDALLKDSPANDGNKCSSGGVMAASSSVPMMQRLNSKINNNTSFSVSSLLHSSYSAKMGF* 1138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo10g2002 1137 Pfam Leucine rich repeat 113 171 IPR001611 GO:0005515
Amo10g2002 1137 Pfam Leucine rich repeat 473 532 IPR001611 GO:0005515
Amo10g2002 1137 Gene3D Phosphorylase Kinase; domain 1 773 873 - -
Amo10g2002 1137 ProSiteProfiles Protein kinase domain profile. 789 1068 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo10g2002 1137 SMART LRR_typ_2 303 327 IPR003591 -
Amo10g2002 1137 SMART LRR_typ_2 495 519 IPR003591 -
Amo10g2002 1137 SMART LRR_typ_2 158 182 IPR003591 -
Amo10g2002 1137 SMART LRR_typ_2 640 670 IPR003591 -
Amo10g2002 1137 SMART LRR_typ_2 591 615 IPR003591 -
Amo10g2002 1137 SMART LRR_typ_2 543 566 IPR003591 -
Amo10g2002 1137 SMART LRR_typ_2 447 471 IPR003591 -
Amo10g2002 1137 SMART LRR_typ_2 567 590 IPR003591 -
Amo10g2002 1137 SMART LRR_typ_2 351 375 IPR003591 -
Amo10g2002 1137 ProSitePatterns Protein kinases ATP-binding region signature. 795 818 IPR017441 GO:0005524
Amo10g2002 1137 SMART serkin_6 789 1069 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo10g2002 1137 Pfam Leucine rich repeat N-terminal domain 43 84 IPR013210 -
Amo10g2002 1137 Gene3D Ribonuclease Inhibitor 42 245 IPR032675 -
Amo10g2002 1137 PANTHER RECEPTOR-LIKE PROTEIN KINASE 2 22 1131 - -
Amo10g2002 1137 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 22 1131 - -
Amo10g2002 1137 SUPERFAMILY Protein kinase-like (PK-like) 766 1065 IPR011009 -
Amo10g2002 1137 SUPERFAMILY L domain-like 58 411 - -
Amo10g2002 1137 Gene3D Ribonuclease Inhibitor 535 620 IPR032675 -
Amo10g2002 1137 Gene3D Ribonuclease Inhibitor 343 438 IPR032675 -
Amo10g2002 1137 Pfam Protein tyrosine and serine/threonine kinase 793 1064 IPR001245 GO:0004672|GO:0006468
Amo10g2002 1137 ProSitePatterns Serine/Threonine protein kinases active-site signature. 918 930 IPR008271 GO:0004672|GO:0006468
Amo10g2002 1137 ProSiteProfiles Leucine-rich repeat profile. 642 664 IPR001611 GO:0005515
Amo10g2002 1137 Gene3D Ribonuclease Inhibitor 246 342 IPR032675 -
Amo10g2002 1137 Gene3D Ribonuclease Inhibitor 439 534 IPR032675 -
Amo10g2002 1137 SUPERFAMILY L domain-like 392 706 - -
Amo10g2002 1137 Gene3D Ribonuclease Inhibitor 621 708 IPR032675 -
Amo10g2002 1137 Gene3D Transferase(Phosphotransferase) domain 1 874 1087 - -
Amo10g2002 1137 PRINTS Leucine-rich repeat signature 594 607 - -
Amo10g2002 1137 PRINTS Leucine-rich repeat signature 640 653 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo10g2002 Amo-Chr10 72516575 72520537 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo10g2002 65 1093 Receptor kinase-like Gene Family AT5G56040 49.234 0.0 974
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Amo10g2002 PK_Tyr_Ser-Thr 7.2e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo10g2002 - - gmx:100818541 1703.34