Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo10g1911 ATGGAGGACTACGATTTTGGAAACCCTAATTATTCTAACCCTAATTGCGCTTATTCTTTCGTGAATATGGCTACTCCCACCTCAGATTTCATGTTATCTGATTATCTATTGCTTGATGGTGATGTTATTATTGATAATCATCATCAACATCAAGATCAAGACTCTTGGTCACAGAGTACTGAATCATCTTCGTTGGCAGCAGCATCAAGCAATGTCAATCACGAATTTGGTGGTGCAACAACCTCCAACCACAATAACAACATAAAATGCAAAACTTATGTGAGTAAGCGAAACAAGCAGGTAGAAGCGAGGCAAAGGGTGGTGTTCAGAACTAGATCGGAGCTAGAGGTCATGGATGATGGATTTAAATGGAGGAAGTATGGAAAGAAGTCAGTAAAGAACAGTCCCAATCCTAGGAACTATTACAAGTGCTCGAGTGTAGGATGCGGTGTGAAGAAAAGAGTGGAAAGGGATGCAGAAGACAGGAGCTATGTGTTAACAAGTTATGACGGTGTTCACAATCACCAAATCCCTTCTTCTAACTCCTACTACACTACTTCTCCATTCTCCATCTTCCATTCTAATGATATTAATTGGTCCCTCCATGCTCTTGCTGCAAACTCATCATCCTCTAATTCCTAG 642 0.4065 MEDYDFGNPNYSNPNCAYSFVNMATPTSDFMLSDYLLLDGDVIIDNHHQHQDQDSWSQSTESSSLAAASSNVNHEFGGATTSNHNNNIKCKTYVSKRNKQVEARQRVVFRTRSELEVMDDGFKWRKYGKKSVKNSPNPRNYYKCSSVGCGVKKRVERDAEDRSYVLTSYDGVHNHQIPSSNSYYTTSPFSIFHSNDINWSLHALAANSSSSNS* 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo10g1911 213 Gene3D WRKY domain 105 171 IPR036576 GO:0003700|GO:0006355|GO:0043565
Amo10g1911 213 MobiDBLite consensus disorder prediction 49 69 - -
Amo10g1911 213 SUPERFAMILY WRKY DNA-binding domain 110 178 IPR036576 GO:0003700|GO:0006355|GO:0043565
Amo10g1911 213 SMART WRKY_cls 118 177 IPR003657 GO:0003700|GO:0006355|GO:0043565
Amo10g1911 213 ProSiteProfiles WRKY domain profile. 113 178 IPR003657 GO:0003700|GO:0006355|GO:0043565
Amo10g1911 213 MobiDBLite consensus disorder prediction 55 69 - -
Amo10g1911 213 PANTHER WRKY TRANSCRIPTION FACTOR 50-RELATED 15 181 - -
Amo10g1911 213 Pfam WRKY DNA -binding domain 119 176 IPR003657 GO:0003700|GO:0006355|GO:0043565
Amo10g1911 213 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 15 181 IPR044810 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo10g1911 Amo-Chr10 68822686 68825796 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo10g1911 14 204 WRKY Transcription Factor Family AT5G64810 43.590 2.97e-40 134
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Amo10g1911 WRKY 5.4e-22 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo10g1911 - - aip:107621044 346.28