Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo10g1890 ATGGTCAAGCACCAATTGAATCGCTCCGATCACCACAGCACCGCAATCAACACCAAGCTTCGTCGTCAGCTCCCTCCAGCTCACGATGACACCGATTATCGAACCGTCGAGGTCTTCGTTCTCGCTACCTTGGATGAAATCGCAAGGGCTGATTCCAAGAAGTTTGAGTTGATATTTGGCGAAATGGAGAGGTTGCATCAACTAGCGGTTTTGGTTTTGCAAGGATTACAAAACCAAGAGGAACAAGTAGCTGATGCAAAGGCTCTGTTGGACATAACGAAATCCTTGGTAATGTCTGTGAAGGGTCATGCTAACGGTGGAGTCACTCCTTCAGAATTTGTATCGAATGGTCCTATTTCTGCTAAAGCAATGCAGAGGAAGGCTGTTAATCGTAGAAGTAGGAAGCATGTGAGGCCCAATGAATTGGCACGGCCAGAAGAGGCTGAAATAAAAGTCAACGAGGCTGGATCACAACTAGTAGTATATGACACCAGAAATGTCCCTCGTGCAAATGAATTCGTGTTGGGGATGTTGCTTTCAGTCACTTTGTGTTCAGATTGGATTTTAAGGATTGGAAGATACGAGGGTGAGGCCATGGCGGTGGGTGGTGGTGGATACAAGGATGAGAGCAAGGGCAATGTGATGCACGGGCGAAGACAGGAGCTGAGTGTCAGTGGGGACGAAGACAAGAGTAAGAGCAGTGGGGTGAGAAGAATAAGATATCGGGCGAGGGCAAGGGACAGTGCAGTGAGTGTTGATGGCTGTGCGTATGGACGGGAATAA 783 0.4815 MVKHQLNRSDHHSTAINTKLRRQLPPAHDDTDYRTVEVFVLATLDEIARADSKKFELIFGEMERLHQLAVLVLQGLQNQEEQVADAKALLDITKSLVMSVKGHANGGVTPSEFVSNGPISAKAMQRKAVNRRSRKHVRPNELARPEEAEIKVNEAGSQLVVYDTRNVPRANEFVLGMLLSVTLCSDWILRIGRYEGEAMAVGGGGYKDESKGNVMHGRRQELSVSGDEDKSKSSGVRRIRYRARARDSAVSVDGCAYGRE* 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo10g1890 260 MobiDBLite consensus disorder prediction 211 237 - -
Amo10g1890 260 PANTHER NON-STRUCTURAL MAINTENANCE OF CHROMOSOMES ELEMENT 4 33 115 - -
Amo10g1890 260 Coils Coil 76 96 - -
Amo10g1890 260 MobiDBLite consensus disorder prediction 1 27 - -
Amo10g1890 260 MobiDBLite consensus disorder prediction 210 237 - -
Amo10g1890 260 PANTHER UNCHARACTERIZED 33 115 IPR027786 GO:0005634|GO:0006281|GO:0030915
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo10g1890 Amo-Chr10 68057639 68061890 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo10g1890 45 115 Non-SMC Element family AT1G51130 42.254 5.86e-10 57.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo10g1890 K22825 - gmx:100781485 95.1301