Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo10g1860 ATGGAGTGTATTGGTAGGCCTTCCAATGGAGAGAGCAGCGTAGTTCGGTTCCCATTGTCACCATCGAGCTCTTTGGTCATTCAGAAAGGAGATATCACCAAATGGTCCATCGATGGTTCCTCCGATGCAATAGTAAATCCTGCAAATGAGAGAATGCTTGGCGGTGGTGGTGCAGATGGCGCGATACATATGGCTGCTGGTCCTGAACTTGTTCAAGCATGTTATAGTGTTCCAGAGGTGAGGCCTGGAATTCGGTGCCCAACTGGGGAGGCAAGGATCACACCTGGTTTTAGATTGCCTGCTTCTCATGTTGTTCATACTGTTGGACCAATCTACAATTCTAATAGTAACCCTGCTGCTTCTCTTTCAAGCGCTTATAGGAATAGTTTGAGGGTTGCGAAGGATAAAAATATTCAGTATATAGCATTCCCAGCTATATCATGTGGTGTCTTTGGATATCCTTACGATGAGGCTGCCACGGTAGCAATTTCTGTCGTCAGGGAGTTTCGAAATGAGTTTAAGGAGATCCACTTCGTTATGTTCTTGCAAGATATTTATCAAGTTTGGGTAAATAAGGCAAATGATCTGATGAAAAATTAG 600 0.44 MECIGRPSNGESSVVRFPLSPSSSLVIQKGDITKWSIDGSSDAIVNPANERMLGGGGADGAIHMAAGPELVQACYSVPEVRPGIRCPTGEARITPGFRLPASHVVHTVGPIYNSNSNPAASLSSAYRNSLRVAKDKNIQYIAFPAISCGVFGYPYDEAATVAISVVREFRNEFKEIHFVMFLQDIYQVWVNKANDLMKN* 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo10g1860 199 Pfam Macro domain 45 162 IPR002589 -
Amo10g1860 199 Gene3D Leucine Aminopeptidase, subunit E, domain 1 7 199 IPR043472 -
Amo10g1860 199 PANTHER MACRO DOMAIN-CONTAINING PROTEIN VPA0103-LIKE ISOFORM X1 16 198 - -
Amo10g1860 199 SMART YBR022w_8 24 162 IPR002589 -
Amo10g1860 199 SUPERFAMILY Macro domain-like 11 192 IPR043472 -
Amo10g1860 199 PANTHER GANGLIOSIDE INDUCED DIFFERENTIATION ASSOCIATED PROTEIN 2-RELATED 16 198 - -
Amo10g1860 199 CDD Macro_OAADPr_deacetylase 25 194 - -
Amo10g1860 199 ProSiteProfiles Macro domain profile. 12 197 IPR002589 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo10g1860 Amo-Chr10 66343753 66345678 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo10g1860 30 135 C2H2 Transcription Factor Family AT5G01310 33.613 2.22e-06 45.4