Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo10g1848 ATGGATGGTAGAGCAGAGAGAGAGAAAATCTATGTCGCCCTTGGGAATAATGTGCTTGAAGGAATTCACACTTTGGCTTGGACTCTCAGTAAATGGCACTCTCACCCAATTTCCATAATTATTCTGCATGTCAAATACAATAACACTTGCAACCATCTTTCAACACTACTTGGGAATTTTCCAGAAGGCATTGCATGTGATGTTAAAATGGAGAGAATCCGGAAAGGCGAGGAAGACAAAATCGACAAGATGCTTTCCAAGTATATATCCTTCTGTGACAATGTACCAGCTGAAATACTTGACATAGAGCAATTTGATGAACCTGTTCAAAAGCGCACAATAGACTTAATTTATGGTCTTGGAATTACCAAATTGGTCATGGCATTCTCATTCATGAAGGCTTCATTGAAACAAAAAGATGCGATGAACGCAATGTTGTATGTTCATAAGCAGAAGCCTGGGTTCTGTGAACTGTTCTTTGTGTGTGAAGGGATACAAGTGTTCCTCCGAGAGAAGGATAATGATGAGACAGTAATGGAGGATGATAATGGTGTCACAGTTGCAAGAATGAAAGATAATAATAATAATAAGTCAGTTGCCAAATGGTGCCTAGAAGGACTAATATTCAGTAACAGTAGAACCATTGATTCCGATCCTACAAGTTCTTCTTCATCCTCCGAGTTCCCTCTTATTAACCAAAACCTCTGGGAATTTTATCTCCGAGAGATTGAAAATTATTATCAGGAATTGCTGTCTTTGAATTTGGAGGAAGAAAACCACAACTCAGATTTTCCACCTSCTCARTATGAGAGCCTCAGAGAGGAACTGAATGAAGCATACAATAGGATCCAGACAAAGAGAAAGGAAGCCAAGCAGAATATAGARAGACATGAAAAGGCTGAATGGGCTATTTGGTTCTGCAACCGTCGGGAAGAAGAGCTTGAGAATCGAATCAAGGAAGAGGTTGCTGCAAGGGAAGAACTAAAGAAGGAACTGGAGAGAAAAAAGGAAGAAGTAGATGAAATAAGTGTTGAAGTTGAAGAGACTAAGAAAATGGTAATACAAGTGTCAGAAACMGAAAGACAACAAAGAAAGGTAATAGAAGTGAAAACACAGATTCTTGGGGAGATTGAAGAGTTGAGGARACAAAGAATAATGGGGAGATCAAGGAGGGTGGTGGCAGAGGCAGTGAATAATAATGGTTGTTGTGTTTTCAGGGAGTACAGAGAGGAGGAGATCGTGGTGGCCACACACAGCTTTTGGGATGAGTTGAGGATGAAAGGTRGCGTTGGAGGATGGAGTAATGTGTATAAAGGAAGGATCAATGGTTATACAGTTGCAATCAAGATGCTCAATTCTCTTCCTGCATTCTCCCAACTACATTATTTCTTAGCTAAGGTGAAGATTCTTGGCAGTATTCGGCACCCACATCTAGTTGATATGCTAGGCTTCTGCTCTGAGCCCAAATGCATAATTCTAGAATACATGGACAGTGGGAGCTTGGGAGACATTCTACATTGCAGGCTAAGAAGATGGTCCTTATTGTGGCATGATCGGATAAGAATAGCGATCGAAGTTTGCTCGGGCCTGGGCTTTCTCCATGAATCTCAGCCCAGGCCCATTATTCATTGTCGCATCGACCCATCCAACATCCTCCTAGACCACAACCTTGTTGCAAAGATCACAGGCTTTGGGCTTCATGGATGTGGTGAAGAATGCAATGTTGGGTCTGATGTAAAGGCGGTAGGGGTTTTGCTGATGCAACTTTTGACCGGAAAAAGAAATTTTCTGGGTATGGTAAGGGAGGATATTTTGGATGGAAGTGGTGGGAAATGGCCATTGGATGTAGCAAAGGAAGTTGAGGACTTAGCAAAGAGGAGCATGTCCAATGAAGACATGAGCATTGCAAGGGTCATGGAGGAACTCAATGAGATTAGAAGAAAGCATGATAGTATAGCTTGGACAAGAATTGATTAG 1977 0.4138 MDGRAEREKIYVALGNNVLEGIHTLAWTLSKWHSHPISIIILHVKYNNTCNHLSTLLGNFPEGIACDVKMERIRKGEEDKIDKMLSKYISFCDNVPAEILDIEQFDEPVQKRTIDLIYGLGITKLVMAFSFMKASLKQKDAMNAMLYVHKQKPGFCELFFVCEGIQVFLREKDNDETVMEDDNGVTVARMKDNNNNKSVAKWCLEGLIFSNSRTIDSDPTSSSSSSEFPLINQNLWEFYLREIENYYQELLSLNLEEENHNSDFPPXQYESLREELNEAYNRIQTKRKEAKQNIERHEKAEWAIWFCNRREEELENRIKEEVAAREELKKELERKKEEVDEISVEVEETKKMVIQVSETERQQRKVIEVKTQILGEIEELRXQRIMGRSRRVVAEAVNNNGCCVFREYREEEIVVATHSFWDELRMKGXVGGWSNVYKGRINGYTVAIKMLNSLPAFSQLHYFLAKVKILGSIRHPHLVDMLGFCSEPKCIILEYMDSGSLGDILHCRLRRWSLLWHDRIRIAIEVCSGLGFLHESQPRPIIHCRIDPSNILLDHNLVAKITGFGLHGCGEECNVGSDVKAVGVLLMQLLTGKRNFLGMVREDILDGSGGKWPLDVAKEVEDLAKRSMSNEDMSIARVMEELNEIRRKHDSIAWTRID* 659
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo10g1848 658 PANTHER U-BOX KINASE FAMILY PROTEIN 5 653 - -
Amo10g1848 658 Pfam Protein tyrosine and serine/threonine kinase 431 567 IPR001245 GO:0004672|GO:0006468
Amo10g1848 658 Coils Coil 269 300 - -
Amo10g1848 658 PANTHER OS02G0152300 PROTEIN 5 653 - -
Amo10g1848 658 Gene3D Transferase(Phosphotransferase) domain 1 420 651 - -
Amo10g1848 658 Coils Coil 311 352 - -
Amo10g1848 658 SUPERFAMILY Protein kinase-like (PK-like) 431 604 IPR011009 -
Amo10g1848 658 ProSiteProfiles Protein kinase domain profile. 422 658 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo10g1848 Amo-Chr10 66158273 66162220 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo10g1848 8 650 U-box Gene Family AT5G65500 39.082 6.09e-135 413
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Amo10g1848 PK_Tyr_Ser-Thr 1.3e-22 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo10g1848 - - adu:107481154 1240.33