Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo10g1825 ATGCTAGATACTTGGCGAAGCTTGGTATTAGATGATAACTCGACGGCCATTGATGTTGATGCTTATAAGTTACCATCCCAAGTAATGAAAACTGCTGCGCAATCACTGAATATGTCGCATCCCTTAGAATTGGGCCTCTCCACTTTGTTAATAGAGCTTGATGACGCTACAGAGTATTATGTGTACTTCCACTTTGGGGAAATTCAGAAACTCACGGCTGGGAGAAAAAGATTAATTAACATAGCCCTTAATTCGCAAAGCATACACTCACAACCCTTGGTTCTTGAATACCTGAAACCAGTTACTGTTGGTTCTTCATACACAGCACAAGTTAGTGCTACTTTTAGTATTAGTGCAGCGTTAGGATCGGAAGCTCCTCCTATCCTCAACGCCTTTGAGGTCTATAAGTTGATCACGCAAATCGATTCTCCAACTGACCCAAGAGATGTTGGTGGTATGAAGGACATCAAAAGTGCGTACCAGATATCTAGGTTAAGTTGGCAAGGAGATCCATGTCTTCCAGATCAATTTGCATGGGAGGGTCTCACTTGCAACTATCAAACCAATCCAAGGATCACGTCATTGAATCTGAGCTCAAGCAAACTGAGAGGGAAGATAAATTCATCATTCTCATGTCTCACGGAACTAGAATACTTGGATTTATCTAATAACGAGTTGGAAGGATCTCTGCCTGAATTTTTGGGAGATCTGTCAAAGTTAAAAGTTCTTAATTTGACAGGAAACAACCTTTCGGGTTTAATTCCTAAGGCTCTCCGAAAGAAGGTTGCAGATGCAAGTTTGCAATTAAGTGTTGGTGGTAATCCTAATCTCTGCGTAAAGGATTCATGCAACAATAAGAAGTTTGTTACACCACTCATGGCATCTCTTGCAGCAGCTTTAATTTTAATCCTTTTGATCCCTGGATTTTGGATATTCCAAAGAAGACGAAAAGAAAAAGAAGCACATATTATTAAAGAGGGAGCATCGTTGAAATTAAAACAAGCAGCATTCACTTACAATGAGATTGTCTCTATCACTGATAACTTCAAAACAATGATTGGAGAAGGAGGATTTGGAAAAGTTTATTTTGGCATTTTACCGGATCACACTCAAGTTGCTATCAAGTTGCTTTCTCCGTCATCACGGCAAGGTTATACGGAGTTTCAATCAGAGGTACATCTTCATAGCCTTATTCGTCATAGGAACTTAGTCTCTCTCGTTGGGTATTGTGATGAAGGAGAGAATAAAGCATTGATTTATGAATATATGTCCAATGGAAATCTCCGGCAACATTTGTCAAGGCAAAACCCATATGTATTGAATTGGAATGAGAGACTCAACATAGCAATTGATGCAGTGAATGATGAGTGGAAGCATGCCAAGATAGCTGATTTTGGTATAAGTAGAGCTTTTCGTAATGATATTGATTCTCACATATCAACCTGTCCTGCTGGTACCCCAGGTTATATTGATCCAGAGTTTCAAAGGGTTGGATGTTTGAATAAGAAAAGCGATATTTACAGCACTGGCATCATTCTGCTTGAGTTGATAAGCGGGAGACCTGCAATATCAAGAGAAGCCAAAGGAGAAGCCATTCACATACTTGAATGGGTTAGGCCCATATTTGAAAGSGGTGATGATGATGACATTCAAAACATTGTTGATTCAAGGTTGTTGCAAGGAGAATTCAACGTTGATTCCGCAAGAAAAGTTGTACAGATTGCAGTGTCTTGCGCTTCACCAACTGCAGCTGAAAGACCAGACATAAATCAAGTCCTTGTAGAGCTGAAGGAATGCTTATCTTTTGATACGCCTGAGGTGTCCGTACACATTGAAACTGAGTGTTCTTTGATCTCCGGGTTCATCACGATTGATTGTGGATCGAACAGAGAATACTTGGACAAAGGAACTGGAATTTGGTACGAGAGCGATAAAAAATTTGTAGAAACAGGAGAGAATTGGAAAGTAGCAGGGAGTTCGAATTTAAACGATCCATACTTTGGGAAAGCGTCGAGAACGGCYAGATGCTTTCCWGAAGGAGTGAGYAACTGCTACACTCTGARGAGAGTGCCACAAKAACAAAGGTATCTAATTAGGGCGATATTCATATATAACAACTATGATGGCAAAAATCAAAACATGACATTTGATATTCATCTTGGAGTGAATCTGTGGGACACAGTGAGTCTTGATTCTGAGTCTTATTGGTCTTTCACTGAGATTATATACACTCACACCAGTGACTCCATACAAATTTGTCTTGTAAAAACTGGCCAATCCACTCCTTGCATTTCTTCTTTGGAACTACGCCCTTTGAGTAGCTCTGTTTATGCTCTCAACTCGACCACCAATTCACCGCTACTGTTGTATTTACGGACTGACATCGCCTCCCTTGATGCACCTGAGTATGTCAGGTACAAAGATGATGTGTATGACCGGATTTGGCGTTATGATCGCGATGTAGATAGTTGGCAAAGCTTGGAATTAGATAACTACTCAACCGCCATTGATATTGGAAGCAATAAATCAGATTCTTATAAAGTACCGTCCAAAGTAATGAGGAGTGTTGCAACATCACAGATTGTTTCTGATGCCTTGGAATTTAGTTATAGCAGTGTGCTTGGAATCGAAGTTGAAAACTCTAGCGGGTATTATACATACTTCCACTTTGCTGAAATTGAGCAACTTGGGGTTGGAAAAAAAAGAATAATTGACATCACCCTTAACTCGCAAAGCATTCTCTCAGAACCGTTGGTTCTTGAATACTTGAAACCAGTCACTGTTAGTTCTGCATATACAGCACATGGTGATATTAATGTTAGCATTAGTGCAACTTCAGGATCAGAAGCTCCCCCAATCCTCAACGCCCTTGAGATCTATCGGTTCGTACCGGAGATTGATTTCCCAACTGACGCAAAAGACGAACTAGAATTTTTGGATTTGTCTGACAATGAGTTGGAAGGACCTGTGCCTGAATTTTTAGCAGAGTTGCCGAAATTAAAAGTTCTTAATTTAACTAAGAACAAGCTTTCAGGTTTAATTCCTGAGGCTCTATTGAAGAAGGCAGATAATAAGTCTTTGCAATTAAGTGAGATTCTGAATATTACTGATAACTTAAAAACAATAATTGGAGAAGGAGGATTTGGAAAAGTTTATCTTGGCGTTCTACAAGATCACACTCAAGCTGCCGTCAAATTGCTTTCGGTATCTTCCACACAAGGCTTCAAAGAATTCCAATCAGAGGTAGAACTCCATAGGAGTATTCGTCATAGGAACTTGGTGTCCCTCGTTGGCTATTGTGATGAAGGAGAGATTAAAGCATTGATTTATGAATACATGGCAAATGGAAATCTCCATCGACATTTATCAAGACTAGATTATTTGCATAATGGTTGTAAGACAGCTATTGTACATAGAGATTTGAAGACTTCAAACATATTACTAGATAAGTGGAATCATGCCAAGATATCTGATTTTGGTCTTAGTAGAGCTTTTCCTAATGATGATGATTCTCACATATCAACTCGCCCTGCTGGCACACCAGGCTACATTGATCCAGAGTTTCATAGGGTTGGATACTTGAATAAAAAGAGCGACGTTTATAGCTTGGGAATAATTCTGCTTGAATTGATGACGGGTGAAGCTGCAATAATAGTAAGAGATGATGGTGCCATTCACATACTTGAATGGGTTAGGCCCATAGTTGAAAGAGGTGATGATATTCAAAACATTGTTGATTCAAGGTTGTTGCAACAAGGAGACTTTAATGTTGACTCTTTAAGGAAAGTTTTTGAGATTGCCTTGTGTTGCACAAGAGTTTCAGCTCAAAGACCAGACATAAGTCAAGTCCTTTTAGACCTAAAGGATTTCCTATTTCTTGAAAATGGTTAG 3891 0.3942 MLDTWRSLVLDDNSTAIDVDAYKLPSQVMKTAAQSLNMSHPLELGLSTLLIELDDATEYYVYFHFGEIQKLTAGRKRLINIALNSQSIHSQPLVLEYLKPVTVGSSYTAQVSATFSISAALGSEAPPILNAFEVYKLITQIDSPTDPRDVGGMKDIKSAYQISRLSWQGDPCLPDQFAWEGLTCNYQTNPRITSLNLSSSKLRGKINSSFSCLTELEYLDLSNNELEGSLPEFLGDLSKLKVLNLTGNNLSGLIPKALRKKVADASLQLSVGGNPNLCVKDSCNNKKFVTPLMASLAAALILILLIPGFWIFQRRRKEKEAHIIKEGASLKLKQAAFTYNEIVSITDNFKTMIGEGGFGKVYFGILPDHTQVAIKLLSPSSRQGYTEFQSEVHLHSLIRHRNLVSLVGYCDEGENKALIYEYMSNGNLRQHLSRQNPYVLNWNERLNIAIDAVNDEWKHAKIADFGISRAFRNDIDSHISTCPAGTPGYIDPEFQRVGCLNKKSDIYSTGIILLELISGRPAISREAKGEAIHILEWVRPIFEXGDDDDIQNIVDSRLLQGEFNVDSARKVVQIAVSCASPTAAERPDINQVLVELKECLSFDTPEVSVHIETECSLISGFITIDCGSNREYLDKGTGIWYESDKKFVETGENWKVAGSSNLNDPYFGKASRTARCFPEGVSNCYTLXRVPQXQRYLIRAIFIYNNYDGKNQNMTFDIHLGVNLWDTVSLDSESYWSFTEIIYTHTSDSIQICLVKTGQSTPCISSLELRPLSSSVYALNSTTNSPLLLYLRTDIASLDAPEYVRYKDDVYDRIWRYDRDVDSWQSLELDNYSTAIDIGSNKSDSYKVPSKVMRSVATSQIVSDALEFSYSSVLGIEVENSSGYYTYFHFAEIEQLGVGKKRIIDITLNSQSILSEPLVLEYLKPVTVSSAYTAHGDINVSISATSGSEAPPILNALEIYRFVPEIDFPTDAKDELEFLDLSDNELEGPVPEFLAELPKLKVLNLTKNKLSGLIPEALLKKADNKSLQLSEILNITDNLKTIIGEGGFGKVYLGVLQDHTQAAVKLLSVSSTQGFKEFQSEVELHRSIRHRNLVSLVGYCDEGEIKALIYEYMANGNLHRHLSRLDYLHNGCKTAIVHRDLKTSNILLDKWNHAKISDFGLSRAFPNDDDSHISTRPAGTPGYIDPEFHRVGYLNKKSDVYSLGIILLELMTGEAAIIVRDDGAIHILEWVRPIVERGDDIQNIVDSRLLQQGDFNVDSLRKVFEIALCCTRVSAQRPDISQVLLDLKDFLFLENG* 1297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo10g1825 1296 Gene3D - 801 959 - -
Amo10g1825 1296 ProSiteProfiles Leucine-rich repeat profile. 999 1020 IPR001611 GO:0005515
Amo10g1825 1296 Gene3D Transferase(Phosphotransferase) domain 1 454 612 - -
Amo10g1825 1296 Gene3D Transferase(Phosphotransferase) domain 1 1114 1293 - -
Amo10g1825 1296 ProSitePatterns Protein kinases ATP-binding region signature. 353 375 IPR017441 GO:0005524
Amo10g1825 1296 PANTHER RECEPTOR-LIKE KINASE PLANT-LIKE PROTEIN, PUTATIVE-RELATED 17 454 - -
Amo10g1825 1296 SMART serkin_6 1037 1291 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo10g1825 1296 SMART serkin_6 347 600 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo10g1825 1296 Pfam Protein kinase domain 1040 1217 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo10g1825 1296 Gene3D Ribonuclease Inhibitor 153 272 IPR032675 -
Amo10g1825 1296 PANTHER OS07G0107800 PROTEIN-RELATED 975 1029 - -
Amo10g1825 1296 PANTHER RECEPTOR-LIKE KINASE PLANT-LIKE PROTEIN, PUTATIVE-RELATED 1024 1294 - -
Amo10g1825 1296 SUPERFAMILY Protein kinase-like (PK-like) 336 610 IPR011009 -
Amo10g1825 1296 SMART LRR_typ_2 237 260 IPR003591 -
Amo10g1825 1296 SMART LRR_typ_2 213 236 IPR003591 -
Amo10g1825 1296 SMART LRR_typ_2 997 1020 IPR003591 -
Amo10g1825 1296 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1136 1148 IPR008271 GO:0004672|GO:0006468
Amo10g1825 1296 ProSitePatterns Protein kinases ATP-binding region signature. 1043 1065 IPR017441 GO:0005524
Amo10g1825 1296 PANTHER OS07G0107800 PROTEIN-RELATED 1024 1294 - -
Amo10g1825 1296 PANTHER OS07G0107800 PROTEIN-RELATED 459 608 - -
Amo10g1825 1296 SUPERFAMILY Protein kinase-like (PK-like) 1029 1287 IPR011009 -
Amo10g1825 1296 PANTHER RECEPTOR-LIKE KINASE PLANT-LIKE PROTEIN, PUTATIVE-RELATED 459 608 - -
Amo10g1825 1296 Pfam Leucine Rich Repeat 239 259 IPR001611 GO:0005515
Amo10g1825 1296 Pfam Leucine Rich Repeat 999 1019 IPR001611 GO:0005515
Amo10g1825 1296 Gene3D Transferase(Phosphotransferase) domain 1 329 453 - -
Amo10g1825 1296 ProSiteProfiles Protein kinase domain profile. 1037 1291 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo10g1825 1296 Pfam Protein tyrosine and serine/threonine kinase 458 594 IPR001245 GO:0004672|GO:0006468
Amo10g1825 1296 Pfam Protein tyrosine and serine/threonine kinase 349 451 IPR001245 GO:0004672|GO:0006468
Amo10g1825 1296 Gene3D Ribonuclease Inhibitor 960 1045 IPR032675 -
Amo10g1825 1296 PANTHER RECEPTOR-LIKE KINASE PLANT-LIKE PROTEIN, PUTATIVE-RELATED 975 1029 - -
Amo10g1825 1296 PANTHER OS07G0107800 PROTEIN-RELATED 17 454 - -
Amo10g1825 1296 SUPERFAMILY L domain-like 976 1030 - -
Amo10g1825 1296 ProSiteProfiles Protein kinase domain profile. 347 600 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo10g1825 1296 SUPERFAMILY L domain-like 175 260 - -
Amo10g1825 1296 PANTHER RECEPTOR-LIKE KINASE PLANT-LIKE PROTEIN, PUTATIVE-RELATED 616 974 - -
Amo10g1825 1296 Pfam Malectin-like domain 5 136 IPR024788 -
Amo10g1825 1296 Pfam Malectin-like domain 624 961 IPR024788 -
Amo10g1825 1296 Gene3D Phosphorylase Kinase; domain 1 1046 1113 - -
Amo10g1825 1296 PANTHER OS07G0107800 PROTEIN-RELATED 616 974 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo10g1825 Amo-Chr10 65011011 65031874 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo10g1825 22 601 Receptor kinase-like Gene Family AT1G51830 40.254 1.75e-138 437
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Amo10g1825 Malectin_like 5.6e-84 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo10g1825 - - ahf:112777738 766.533