Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo10g1816 ATGGCAAATGCAGATTCAGGTGAATCTTCTGAAACCAACAAGAGTAACTACGACATTTTCTTGAGCTTTAGGGGTGAGGACACGCGTCACACGTTCACAGGTTATCTCTACGAAGCTTTGTCCCGCAAGGGAATCAAAACCTTCATGGACAATGAGAATCTGAGGATAGGGGACTCTATTGGACCTAATCTTCTTAAAGCAATTGAACATTCAAGGATTTCGATTGTTGTTTTCTCTGAAAATTATGCTGCTTCCAAGTGGTGCCTTGATGAACTCGTGAAGATCCTCGAGTGCCGGAACGAGAAGAATATGCTCTTGTTTCCAATCTTCTACAAAGTAGCTCCCTCTGATGTACGGTATCAGAGAAACAGTTATGAAAAAGCCATGGCTGCTCACGAACTTAGGTATGGTTGTGACTCTGAGAAGGTGAAAAAATGGAGGTCAGCATTGTTTGATGTATCCCAAATTTCAGGACATGTTTTGAGAGAGGGGTATGAATACAAGTTCATTCAAGATATTGTTTGCAAGGCCGATGCTAAATTACTATCTTCAAAACAGTTACACATTGATGAGGACATGGTTGGGCTGCAGTTTAAAGTTGAGGAAGTGAAGTCACTTCTAGATCTCAAGTCTAGTGACAGCACTTCCATGMTGGGGATTTATGGAATTGGTGGTATTGGCAAAACAACACTTGCGAAAGCTTTGTATAACACCATCTGCAACCAGTTTGAAGGWGCTTGTTTTCTCTTCGATGTCAGAAAAACTTCAAATCAAGACAAGGGGCAAGTGCATCTGCAACAAACTCTCTTGTTGGAACTGTTGGAAGAGGGAAAAATCAAGTTTAGCAGCGTAGAAAAAGGGATCTCTATATTGAAAGACAGACTTGCTGGAAAAAAAGTCCTTGTAGTCCTTGATGATGTTGACAACATGGAACAATTAAGAGCARTGGCAGGAAAATGTYGTTGGTTTGGTTCCGGGAGCAGGATTATTATAACAACAAGGAATAKATATTTGCTAARYGCTCATCAGGTCAAAAGCATTTATGAGATGAAAATGTTAAATGTCTATGAATCTCTTGAGCTCTTTTGTCTGAATGCATTCAAAATGAGTAGTCCTGTAACAAACTATCATGACCTTTCCATTAGAGCAATAGGGTATGCCAAAGGGCTTCCATTGGCTTTAAAAGTTATAGGCTCTAATTTGATCGGCAAAGATTTAAATGAGTGGAAGTCTGCATTGAAGAAATATAAGCGGAATCCTCATAGAGATATTCAAAGCATTTTAAGAATAAGCTATGATAGTTTAGAAAGCAATGAAAAGGACATTTTTCTTGACATCGCATGCTTCTTCAATGGGCAGAGGTTGGAGTATGTGAAAAGAATACTTGATGGGTGTGAGTTCTACACGGAAGATGGTCTTAGAATACTTATTGATAGATCTCTCATAACAGTTGAAGATGGTCACTTGAGGATGCATGATCTAATACAGGACATGGGTAGAGATGTTGTAAAGCAGGAGGCGCCAAAAGATGCCGCTGAACGTAGTAGATTATGGCTTAGAGAAGATGTCCTTCAAGTACTAACTGAAAATAGAGGAAGTAGCAAAATTGAAGGGATAAAGCTTGATTGCCTGGAAGAAAATTTGATTTCTAGAGCCTTTGAGGAGATGAAGAAGCTTAGAATTCTCATCGTGCGGAACACAAGCTTCTCATTCTCATTCGGACGTATTCATCTACCAAACCAGTTAAGGCTGCTTGATTGGAAGGGTTTCCCTTCGAAATCTTTCCCACCAGATTTTTATCCCAAGAAAATTGCTGCCTTCAACTTACGTTGCAGTCCTCTTGTATTGAAAAAACCATTTCAGAAATTTGAGCATTTGASCTACATGAATTTCTCCTATTGTCAATCCATCACTAGAATTCCTGATGTMTCTGGAGCKAAAAATTTAAKAGAATTGATACTTAATAAATGCAAGAAACTGGTAAAGGTTGATGAATCGGTCGGRTTTCTCCCTAACCTTGTTTACTTAAGTGCTTCTGGATGCATTCAACTAAGAAGTTTTCTGCCAAGAATCTTTTTGCCGTCTCTTGAATTCCTTTCCTTTGACATGTGTAGAAGACTTGCATTCTTTCCAGACATAGTGGGAACAATGGATAAGCCATTAAAAATTTGTATGAAAGATACTGCTATTAGAGAGCTTCCACCTTCCTTTGCCAATCTTAGTGGACTTGGTTACTTAAATATGTCAAATTGTAAGCAACTCCAAAATCTACCAAGTAAACTATTTGTCTTGCCAAATTTTGTCACATTAAAAATTGGAGGGTGCCCTCAACTTCGGGAATCATTTACACAGTTCAAAGGATGCGATTCTAGAGCAGAGTGCTGGCCAAATCTAGAGACTTTGCATTTCTGCAATGCCAGTCTATCAGATGAAGATCTTTATGTGATTGTACATAGTTTCCCAAAGCTGAGAGAATTAAATGTGTCATCAAACTGTTTTGTATCAATCCCAACGTACATTAAGGAATCTATTAACTTGACAACTCTTGATGTGAGTTATTGCCTGAAGCTACAGCAAATTCCAGCACTGCCCTCTAGTATTCAAAAAGTAGATGCAAGACACTGCAATTCCTTAACAGCTGACTCATCAAGTACGCTTTGGTCACAGATGCCCAGAGAGATTGATAGATTAGAAGTTGTGATGCCCGAAACAGAGATTCCAGAATGGTTGGACTATCATGGCCATGGTGTGATTCCCATTTTCTGGGCTCGTGGCAAGTTCCCTGTTGTGGCTTTGGCCTTTGTGTTCGCCGAAATAAACTATCATGCTGTTAACTTGCACTTGTTCATTGACAATGAGCATGTAAGTGTTCAAAGCCAACATCTTATTTTCAATATAGCAGAAGATCATGTGCTGTTGTGCGACCTGCGAGTTTTATTCAGAGATGAGGAGTGGAAGAGGCTTGATGCTCGTTTCCGACATGATAATTGTTGGAAGTCCATCCAGGTGAAGTGTGAACCAGACATCATCCTGAAAGACTGGGGGGTTCATGTATATAAGAAAGAAACAAACATGGCTAATATCCAATTCTCATGTCCATATACAGCTACCTTAGGATCTCGATCGTTTATGGATTTAACCTTGAACATGATATGGGTATCAAGAGATTGGGTGGAGGAAGGAAGTGCAACAGGAACAGATTCCTCAAGTGATGTGGAAGAATTGGATACTATTGTACAAGAGAAAGAAGCATCATGCTCAAAAAGTGTCAAGGTACTTGACAATTCAAGTCCTTGTGCTGACTCTTGCAGCTGCTGCTACTCACCCGGATCGTCATCTTTCAAGAAACTTCGTCGTTTTAAGTTCAGAAGACGATTGTCGATAAATATGATCAGTCGATGGTCGGAAGATGATGATGTTGATGATATTGATTTTAGGAACCAAGAGCCTCTTTCCTTCTCAGAGAACCTCCAAACTGTGATGGAAAACTTGAGGAGGTTTACGGCTCCAAGACAAAAGAAAGGCATGAGCAACGGAGACCATGACAATGATAGCTTCAAATGGCTGGCTGAGACAGAGATATTAAGTGATGGCGAGTACGAGGACGAGGATGAAGAGTCAGATTCAGAAGCATAG 3636 0.3977 MANADSGESSETNKSNYDIFLSFRGEDTRHTFTGYLYEALSRKGIKTFMDNENLRIGDSIGPNLLKAIEHSRISIVVFSENYAASKWCLDELVKILECRNEKNMLLFPIFYKVAPSDVRYQRNSYEKAMAAHELRYGCDSEKVKKWRSALFDVSQISGHVLREGYEYKFIQDIVCKADAKLLSSKQLHIDEDMVGLQFKVEEVKSLLDLKSSDSTSMXGIYGIGGIGKTTLAKALYNTICNQFEGACFLFDVRKTSNQDKGQVHLQQTLLLELLEEGKIKFSSVEKGISILKDRLAGKKVLVVLDDVDNMEQLRAXAGKCXWFGSGSRIIITTRNXYLLXAHQVKSIYEMKMLNVYESLELFCLNAFKMSSPVTNYHDLSIRAIGYAKGLPLALKVIGSNLIGKDLNEWKSALKKYKRNPHRDIQSILRISYDSLESNEKDIFLDIACFFNGQRLEYVKRILDGCEFYTEDGLRILIDRSLITVEDGHLRMHDLIQDMGRDVVKQEAPKDAAERSRLWLREDVLQVLTENRGSSKIEGIKLDCLEENLISRAFEEMKKLRILIVRNTSFSFSFGRIHLPNQLRLLDWKGFPSKSFPPDFYPKKIAAFNLRCSPLVLKKPFQKFEHLXYMNFSYCQSITRIPDVSGAKNLXELILNKCKKLVKVDESVGFLPNLVYLSASGCIQLRSFLPRIFLPSLEFLSFDMCRRLAFFPDIVGTMDKPLKICMKDTAIRELPPSFANLSGLGYLNMSNCKQLQNLPSKLFVLPNFVTLKIGGCPQLRESFTQFKGCDSRAECWPNLETLHFCNASLSDEDLYVIVHSFPKLRELNVSSNCFVSIPTYIKESINLTTLDVSYCLKLQQIPALPSSIQKVDARHCNSLTADSSSTLWSQMPREIDRLEVVMPETEIPEWLDYHGHGVIPIFWARGKFPVVALAFVFAEINYHAVNLHLFIDNEHVSVQSQHLIFNIAEDHVLLCDLRVLFRDEEWKRLDARFRHDNCWKSIQVKCEPDIILKDWGVHVYKKETNMANIQFSCPYTATLGSRSFMDLTLNMIWVSRDWVEEGSATGTDSSSDVEELDTIVQEKEASCSKSVKVLDNSSPCADSCSCCYSPGSSSFKKLRRFKFRRRLSINMISRWSEDDDVDDIDFRNQEPLSFSENLQTVMENLRRFTAPRQKKGMSNGDHDNDSFKWLAETEILSDGEYEDEDEESDSEA* 1212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo10g1816 1211 Gene3D - 181 347 IPR027417 -
Amo10g1816 1211 SUPERFAMILY Toll/Interleukin receptor TIR domain 8 158 IPR035897 -
Amo10g1816 1211 Gene3D - 352 436 IPR042197 -
Amo10g1816 1211 Pfam TIR domain 16 176 IPR000157 GO:0007165
Amo10g1816 1211 Gene3D - 9 180 IPR035897 -
Amo10g1816 1211 Pfam NB-ARC domain 199 436 IPR002182 GO:0043531
Amo10g1816 1211 MobiDBLite consensus disorder prediction 1167 1211 - -
Amo10g1816 1211 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 12 939 IPR044974 GO:0006952
Amo10g1816 1211 PRINTS Disease resistance protein signature 387 401 - -
Amo10g1816 1211 PRINTS Disease resistance protein signature 217 232 - -
Amo10g1816 1211 PRINTS Disease resistance protein signature 294 308 - -
Amo10g1816 1211 PRINTS Disease resistance protein signature 738 754 - -
Amo10g1816 1211 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 187 446 IPR027417 -
Amo10g1816 1211 ProSiteProfiles TIR domain profile. 15 181 IPR000157 GO:0007165
Amo10g1816 1211 SUPERFAMILY L domain-like 490 879 - -
Amo10g1816 1211 SMART till_3 16 156 IPR000157 GO:0007165
Amo10g1816 1211 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 12 939 - -
Amo10g1816 1211 Gene3D Ribonuclease Inhibitor 503 723 IPR032675 -
Amo10g1816 1211 Gene3D Ribonuclease Inhibitor 724 899 IPR032675 -
Amo10g1816 1211 MobiDBLite consensus disorder prediction 1195 1211 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo10g1816 Amo-Chr10 64654639 64659688 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo10g1816 12 810 WRKY Transcription Factor Family AT4G12020 31.707 1.08e-100 351
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo10g1816 - - aip:107611979 2334.3