Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo10g1787 ATGGAAGACACATTTATGGATGAGGCGGTATTGGATGGAGTGAAAGGGTGGAGGACGTTGCCTTCGAAGAGGTATGTGAAAATAGTACAAGACATGGGAATGGAAGATGATGAGGTTGAGGTAGGTGGAGGACAACAAAGTGTCAAAAATGGAACGAACGCAGCTGAAGTTGTGACAATAACGGCTAATGATTTTTTGCGAATGGAGTTCAACAATCCTAAGGAAGCTGCTTGTATATATGAAGAGTACAGCCGGGTGAAGGGTTTTGCTGTACGACAAGGTAAGAAGACAAAAAACAAGAGAGGGAAATTTGTGCGGATTACGTATTTGTGCAATAGAAAAGGTTTTTGGGATAAGAAATTGTTAGAAAAGCAGGATCGCAAACGAGAGCACAAGGTTATCACCCGTTGTGGGTGTCCTACCGAGATACAGATAAAGCCAAGGATTGATACGGAAAAGTAG 462 0.4242 MEDTFMDEAVLDGVKGWRTLPSKRYVKIVQDMGMEDDEVEVGGGQQSVKNGTNAAEVVTITANDFLRMEFNNPKEAACIYEEYSRVKGFAVRQGKKTKNKRGKFVRITYLCNRKGFWDKKLLEKQDRKREHKVITRCGCPTEIQIKPRIDTEK* 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo10g1787 153 Pfam FAR1 DNA-binding domain 80 148 IPR004330 -
Amo10g1787 153 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN 39 142 - -
Amo10g1787 153 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 39 142 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo10g1787 Amo-Chr10 63610023 63610605 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Amo10g1787 FAR1 5.5e-10 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo10g1787 - K17604 adu:107486709 221.476