Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo10g1749 ATGGAAGGTTCTGATAATTCTGATTTAGATTTTAACCAAAAGGGTGTGGAGGCGACACCGTATTATACACCACATCAGAAACCAAGTTTACCAGAGTCTGGCCCTGAACCTGTCAATATCGACTTCTCGTCTCCAGACTCAGGTATTGATAGCTTTGGGGCTTCTATGAAGGAGGAGCCTGGATCATCTTCCTCGACATCCTCAGATTCGGAGACAGAATCTTTTAGTCTATCTGGAACTGACATCCATGACACACCTGCGAATACTGATGAAAAAGGGCTGCCTAAAGGTATTAAGATGCAAGAATTTCCTGATACTGATGCAGAGCAACACAGTCATAAACTTGGGGAGGATAAAACAGATAGCATTCTGATGGGACAGAATAGAAATTATGAAGAGTTGCTCAGCAAATTCAATAAAACTGAGGAAGAGCTTAAAGTTTCCAACTTAAAACTTTCACTCTCAGAACAGGAGATTCTCCAGTTGAAAGATGAGCTTGACAATGTGCGGAAAGAATTAAAAGTGAAAGTGAATGATCTTGAATGTGAAAATGGACAGGTACTGGAGTTGCAAAAGCAAACAGCCGAATTGGAAACTCATGTTCCAGATTGTTGCAACAAGATTGCAAATTTGGTGGAACAGCTGGAGGCAGCAAAAGAACAGCTTAAGACGTCAAATGATGAACTTGTAAGGTTAAGAGAGGAACTCCAGAGTAGGTCATCTGACACGCATGAGTTGCAGGCACAGCTTGAAGTGGCAAAGGAAAACACAGCCACATTAGAATGCCAGCTTGGTTCTAGGAGAAAGCAGATTCTGCAGCTTGAGGGCAGAATTTCATGTTACAAAGCTAACGGAACAAAGCATGCACGTGCGATGCAAAAATTGAAGGATGAAATGCTTACTTCCAAGGCACAAATCACTTGGGAGAGAGATCAGATGCAAGCTAATATTCATAGTTTGTCAGCGATTCAAAAAGAGATGGGATCTACACTCCGGGAGTGCGAAGCTAGAGGCGATCTTTTGCAAAAGCAGTTGATACAATTTGAAACCGAAAAATTGAAAGAAGAAGAGCAGCATGCTACCGAAAAGATGGCTTTGCAGGGTGAAATCAGTTGTTTGAAGGAAGAGCTTGATCAGAGAAGACATGATGTAGAAGCTGTTAATATGGAATTTGACAAGCATAAGCAAAAGTATGACATGCTCACAACTGAAAGAGATGAAGCCAATGCCAAGATTGACAAACTTATGGCTGAGCTAAGCTTCCGGGACAATCAAATTACAGAAGTGGACAGAGAGTTATCCCAGCTACGTGCACAAAACGCAGAGTTGATTTCAGTATCGGAAACAAGAAAGAACCTAATTGATGAGTTGAAAATGAATGTGGAAGAGCTTGAAAAAGAGGTGACTATGCAGAAGGTTGTGATCTCAGATAGAGATGAAGAGAAGAGGGAGGCAATCCGGCAGCTATGCATTTCACTTGAGCACTATAGGAATGGATACAAAGAGCTTCTTCAAGCCTTTACAGGGTTCAGGCGTCATCATGCTGTTATAGCATCCTAA 1560 0.4173 MEGSDNSDLDFNQKGVEATPYYTPHQKPSLPESGPEPVNIDFSSPDSGIDSFGASMKEEPGSSSSTSSDSETESFSLSGTDIHDTPANTDEKGLPKGIKMQEFPDTDAEQHSHKLGEDKTDSILMGQNRNYEELLSKFNKTEEELKVSNLKLSLSEQEILQLKDELDNVRKELKVKVNDLECENGQVLELQKQTAELETHVPDCCNKIANLVEQLEAAKEQLKTSNDELVRLREELQSRSSDTHELQAQLEVAKENTATLECQLGSRRKQILQLEGRISCYKANGTKHARAMQKLKDEMLTSKAQITWERDQMQANIHSLSAIQKEMGSTLRECEARGDLLQKQLIQFETEKLKEEEQHATEKMALQGEISCLKEELDQRRHDVEAVNMEFDKHKQKYDMLTTERDEANAKIDKLMAELSFRDNQITEVDRELSQLRAQNAELISVSETRKNLIDELKMNVEELEKEVTMQKVVISDRDEEKREAIRQLCISLEHYRNGYKELLQAFTGFRRHHAVIAS* 520
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo10g1749 519 MobiDBLite consensus disorder prediction 1 99 - -
Amo10g1749 519 Gene3D - 360 516 - -
Amo10g1749 519 Gene3D - 144 317 - -
Amo10g1749 519 Coils Coil 426 474 - -
Amo10g1749 519 PANTHER PROTEIN NETWORKED 4A 14 519 - -
Amo10g1749 519 SUPERFAMILY Tropomyosin 129 320 - -
Amo10g1749 519 MobiDBLite consensus disorder prediction 85 99 - -
Amo10g1749 519 Coils Coil 243 263 - -
Amo10g1749 519 PANTHER TROPOMYOSIN 14 519 - -
Amo10g1749 519 Coils Coil 124 183 - -
Amo10g1749 519 Coils Coil 205 239 - -
Amo10g1749 519 MobiDBLite consensus disorder prediction 57 84 - -
Amo10g1749 519 Coils Coil 391 418 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo10g1749 Amo-Chr10 62224180 62226747 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo10g1749 246 514 EF-hand Containing Proteins AT5G05180 31.741 2.30e-33 129
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo10g1749 - - adu:107470107 987.252
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo10g1749 10 62224180 62226747 Amo17g2468 17 122011424 122011955 hybridization