Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo10g1741 ATGGGAGCTCTATGCATGCATGAGCATTCTGAAAAACTTGAAGGCCTTGTCAATGATGCTATAGATAAACGTGCTAAAATTGTTGCAAGAGGAAGTTTCGGGCCTATTGGTGGAGATGCAGTTGATCAGTATTACCCCCCAACTGTGATTGTTAATGTGAATCACTCCATGAGATTGATGCAAGAAGAGACATTTGGACCAATCGTGCCAATAATGAAATTCAGCTCTGATGAAGAGGTTGTCAAGCTTGCAAATGACTCAAGATATGGGCTTGGCTGTGCTGTTTTCTCAGGCAATTAG 300 0.42 MGALCMHEHSEKLEGLVNDAIDKRAKIVARGSFGPIGGDAVDQYYPPTVIVNVNHSMRLMQEETFGPIVPIMKFSSDEEVVKLANDSRYGLGCAVFSGN* 100
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo10g1741 99 Pfam Aldehyde dehydrogenase family 1 98 IPR015590 GO:0016491
Amo10g1741 99 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 1 98 IPR016163 GO:0016620
Amo10g1741 99 SUPERFAMILY ALDH-like 1 99 IPR016161 GO:0016491
Amo10g1741 99 PANTHER ALDEHYDE DEHYDROGENASE-LIKE PROTEIN YHR039C-RELATED 1 99 - -
Amo10g1741 99 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 1 99 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo10g1741 Amo-Chr10 62041494 62042078 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo10g1741 1 99 Aldehyde Dehydrogenase Gene Family AT3G66658 71.717 6.27e-50 164
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo10g1741 - - aprc:113848242 183.726