Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo10g1738 ATGGGAGCCGTTGTTGACTGTTATCCGCCGCACGCCGGCGAGGTTGCAGTTTTGTCTCTCAARTCGCTTCCCTTAGGTTTCCGATTTCGACCTTCCGACGAYGAGCTTGTTGARTATTATCTGAGACAGAAAATCAACGGAAATGGAGAAGAAGTCTGGGTTATTCGAGAAATCGATGTTTGCAAATGGGAGCCTTGGGACTTGCCAGATTTGTCGGTGATAAGAAACAAGGATCCGGAGTGGTTCTTCTTCTGTCCACAGGACCGGAAGTATCCAAATGGTCACCGGTTGAACCGAGCAACCAATCATGGGTACTGGAAGGCCACAGGAAAAGATCGTAAGATCAAGTCAGGTTCCACCTTGATTGGGATGAAGAAGACTCTGGTGTTCTACACAGGTCGTGCTCCCAAAGGGAAGAGAACCAATTGGGTCATGCATGAGTACCGCCCCACCCTCAAGGAGCTTGATGGCACCAACCCTGGACAGAATGCGTATGTACTCTGCCGATTATTCAAGAAACAAGATGAGAGTCTTGAGGTTTCAAACTGTGATGAGGTGGAACAAACAGATTCCGCTCCCATGGCGGCCAATTACTCCCCTGAAGAAATACAGTCTGATCAGGCTCTGGCTGAAGTATCGCCGTCTCAAGTTACAGATGAGAAGCACCAGGGTGTTATCCCTGAGAWCTCTGAGGAAGCGGTTTCCAACGTTATAACCTCTGCTGATTGCCATAGTGACGGATATGATGCTTGTGAAAGGCGAAATCAAGCTTTTGAACTACCTGCTGAGGACATTCCGCCGTTGAATTGGGACATATTCAATGACCCCGAYGACAAGATATTTGATGACAAATTATTCTCCCCAGTCCATAGCCATATTCCACCAGAATTTTACTACCAAGCAAACAATGAGACAAATATTGCAGACATCTTAAATTCTGTCAATTGGGATGAGATCTCCTATGAGGATCCCTATAGTCAAGCACAGAACAACTTTTTTAATAATGTTAAGCAAAGTGTATCAGGTAGCGAACCAGATGCAGGGCTGACCAATATGACATGCATACACCCGACGAATGTTGTTTATCCCGAGGAGGCAATTCACAGAAAGGTTGCTTTGGCAACAACTCCGCAATTTTGCAGCACCTTCACGTCTGACTTCAGTGCTGATGAGCAGAAGAGCAGTGTCGCGTTAATTCAAAACAATTCCCAGATGGCTTCTTTTCCGGATGCCAGAACAGGCCAAGTGTATAACGTATTCAATGATTATGAGCAGCCGAGAAACCTTAATACCTATGTTAGTGGTGATACTGGAATCAAGATAAGGACTCGACAAGTGCGAAATGAACAACCAGCAATGATCTTTACAGATCAAGGTAATGCAGCAAGGAGAATCCGATTGTTAAAGCAGTGTGCAAATGTCTCAAACAAGATGGCAGATGATGGGAGTCCTAAACAAGAGCATGATTCAAAACCAATAATTGCAGGGAACAAAAACAAAACTTTCAAAAGTCACACTGCAGATAAGCATGATACTGCTAATGATCTGAATGAACGCCAGGAGAAAACTGAGTCAACTGATAAAAGAAACATGATATCTAAACTTGCAAAAGGAGGTTCTTCCATGTTGGGGTTGAAGGGATTATTGCGCAGAAGGCTTAGTTACATATCAAAGGCCTCCTCCAATTTCAAAATGTGGTCATGTGTTGTTGTGGCTTCTGCCTTTGTATTGGTCTCGTTTCTGTTCTTTGCTAACATATGGGGATATATTAACTTATGA 1779 0.4401 MGAVVDCYPPHAGEVAVLSLKSLPLGFRFRPSDDELVEYYLRQKINGNGEEVWVIREIDVCKWEPWDLPDLSVIRNKDPEWFFFCPQDRKYPNGHRLNRATNHGYWKATGKDRKIKSGSTLIGMKKTLVFYTGRAPKGKRTNWVMHEYRPTLKELDGTNPGQNAYVLCRLFKKQDESLEVSNCDEVEQTDSAPMAANYSPEEIQSDQALAEVSPSQVTDEKHQGVIPEXSEEAVSNVITSADCHSDGYDACERRNQAFELPAEDIPPLNWDIFNDPDDKIFDDKLFSPVHSHIPPEFYYQANNETNIADILNSVNWDEISYEDPYSQAQNNFFNNVKQSVSGSEPDAGLTNMTCIHPTNVVYPEEAIHRKVALATTPQFCSTFTSDFSADEQKSSVALIQNNSQMASFPDARTGQVYNVFNDYEQPRNLNTYVSGDTGIKIRTRQVRNEQPAMIFTDQGNAARRIRLLKQCANVSNKMADDGSPKQEHDSKPIIAGNKNKTFKSHTADKHDTANDLNERQEKTESTDKRNMISKLAKGGSSMLGLKGLLRRRLSYISKASSNFKMWSCVVVASAFVLVSFLFFANIWGYINL* 593
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo10g1738 592 ProSiteProfiles NAC domain profile. 23 173 IPR003441 GO:0003677|GO:0006355
Amo10g1738 592 Gene3D NAC domain 32 177 IPR036093 GO:0003677|GO:0006355
Amo10g1738 592 Pfam No apical meristem (NAM) protein 24 149 IPR003441 GO:0003677|GO:0006355
Amo10g1738 592 MobiDBLite consensus disorder prediction 502 528 - -
Amo10g1738 592 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 18 453 - -
Amo10g1738 592 PANTHER NAC DOMAIN-CONTAINING PROTEIN 91 18 453 - -
Amo10g1738 592 MobiDBLite consensus disorder prediction 476 528 - -
Amo10g1738 592 SUPERFAMILY NAC domain 19 173 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo10g1738 Amo-Chr10 61952595 61956046 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo10g1738 15 470 NAC Transcription Factor Family AT4G35580 40.343 5.01e-95 299
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Amo10g1738 NAM 7.3e-36 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo10g1738 - - gmx:100777071 661.373