LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Amo10g1723	ATGGCTAAGCCATCGACCGTGGGTGCCTTCGTCATCGGGGAACCTCTACTCGGCCCTGTTCGCATCGTTCCTCCTCTCCTCGCCGTCGCACGAAGTTCTGAGTTGAGCTTGTGGCGTCGCCGTCGCGAAGGGTTCCTCCCCTCCTCGCCGTGTGTCGTTTCTGATTCTCTGCTCCTCGCCTGTGATAGTGATCCTTCTACTTGGAGCTACATCAATGATGATGTTCAATTTCATATAGGACAGCGGTATGCTTCAATTGGGATGTATGATGTGGCTGTGAAGCATATGATGGAAATCTTGGCCTGTAGTCACCAGTCCAAGGCAACACAGGAATTATTCCTTAGTGACTTTCTTCAAACTGTGAAGGTTGGGGAATACCAGGGTCCATATAAGGGGCTTCTGGACAAGTATCGTCCTGAAATGGTTCTTGATACTCCAATTACCGAGTTTATGACTTTTAACTTCTCCATGCATTGGGGCAAGGGAAAGCAAAAGGAGAAGGTGAACAACCAGCTCCTCTCTGAAGCTCCCAAATTCAAGCTCATCAATCCTTCTATTCTCGCTGATCATTTGAGGACAACTCCATCTACCATATACTTATGTTGCCCAAGAGAGTGGACAGCAAATGGGCCCAAAGATAAGAACTAG	648	0.4815	MAKPSTVGAFVIGEPLLGPVRIVPPLLAVARSSELSLWRRRREGFLPSSPCVVSDSLLLACDSDPSTWSYINDDVQFHIGQRYASIGMYDVAVKHMMEILACSHQSKATQELFLSDFLQTVKVGEYQGPYKGLLDKYRPEMVLDTPITEFMTFNFSMHWGKGKQKEKVNNQLLSEAPKFKLINPSILADHLRTTPSTIYLCCPREWTANGPKDKN*	216

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Amo10g1723	215	PANTHER	TRANSPORT PROTEIN TRAPP	67	123	IPR024420	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Amo10g1723	Amo-Chr10	61111973	61115470	Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Amo10g1723	166	210	Cytoplasmic Ribosomal Protein Gene Family	AT4G34555	50.909	1.14e-06	44.3

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Amo10g1723	K20305		-	aip:107629560	133.265