Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo10g1708 ATGGCGAAGCTTGGAATGATAGTTGACTCCTTTGGAGGAAGAATTGCAGCTTCTATGAAACAATTCCCTGTTATGATGGATCATTGTGTAATCATATTAGCAGAATTTTCATTTCACTTATTTGATTATTTGATTTGTGTTCAATATCCAAGTAGTAGTGATCTGACACACGTCAAAGATTCAAGTATGCCTTCTGTTTTAGAACAGAACAAAGATGATAACAACAACAAGAACAATAGTATAAGCAACAAGTTTTTGCTTCCAAGAAAGCCTATAATGGCAGCGAGAATTTCAGGCAAAYAAACTGAGGCAAGACACTGCTTGACSAYCAAATCCAATRATTCTGAGGATTCTTTAACTGATGGGAGCAGAAGTAACCTTTTGGAAGTTAATGAAGTAGATCACCATGAAAGACAAGTAGAGGAAGCTCAGCAGAAAGGATTGTCCCTCACTGATGGAGATAAGGATTGTGCAGACACTGTGATTGGGAACTGGTACTTGAGAGGGATAAGTGGTGGAAAAAAGAGAAGGGTTAGCATTGCCTTGGAGATTTTGATGAGGCCAAGATTGCTCTTCCTTGATGAACCTACAAGTGGACTTGACAGTGCATCAGCTTTCTTTGTGACTCAAACATTATGTGCCTTGGCAAGAAATGAAAAAACCATGATAGCTTCTATTCATCAACCTAGCAGTGAAGTTTTCGAACTATTTGATCACTTGTACTTGCTTTCGGGGGGTAAAACTGTCTATTTTGGCCACGCTTTTGCAGAATATGAGGCAAGAAACTTAAATTCTGCCTCAGTATCCACTCTTTTCTTTGCACAAGCTGGATTTTCATGCCCTGCTTTGAGGAACCCATCAGATCACTTCCTTAGGTGCATCAATTCTGACTTTGACAAAGTCAAGGCCACTCTTAAAGGCTCCATGAAACTCAGGGTACTAAGGAGATTATTGGACTTTGACAAGAAACTTCCTTCTCCTGATGCTCTTCTCATCAATAGGCAAAGAGATTCTGCTGTCTTTATCGGTCAAGCAGGGAAGACTTACAAATTCAGAGTGTCCAATGTTAGGTTAACAACATCAATCAACTTCAGGATTCAAGGCCACTCATTGAAACTGATTGAAGTTGAAGGTGCTCACACTTTGATAATACGATGA 1158 0.3938 MAKLGMIVDSFGGRIAASMKQFPVMMDHCVIILAEFSFHLFDYLICVQYPSSSDLTHVKDSSMPSVLEQNKDDNNNKNNSISNKFLLPRKPIMAARISGKXTEARHCLTXKSNXSEDSLTDGSRSNLLEVNEVDHHERQVEEAQQKGLSLTDGDKDCADTVIGNWYLRGISGGKKRRVSIALEILMRPRLLFLDEPTSGLDSASAFFVTQTLCALARNEKTMIASIHQPSSEVFELFDHLYLLSGGKTVYFGHAFAEYEARNLNSASVSTLFFAQAGFSCPALRNPSDHFLRCINSDFDKVKATLKGSMKLRVLRRLLDFDKKLPSPDALLINRQRDSAVFIGQAGKTYKFRVSNVRLTTSINFRIQGHSLKLIEVEGAHTLIIR* 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo10g1708 385 Gene3D - 96 271 IPR027417 -
Amo10g1708 385 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 160 258 IPR027417 -
Amo10g1708 385 PANTHER OS04G0528300 PROTEIN 134 321 - -
Amo10g1708 385 Coils Coil 126 146 - -
Amo10g1708 385 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 134 321 - -
Amo10g1708 385 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 2 270 IPR003439 GO:0005524
Amo10g1708 385 Gene3D - 288 382 IPR008972 -
Amo10g1708 385 SUPERFAMILY Cupredoxins 324 380 IPR008972 -
Amo10g1708 385 Pfam ABC transporter 117 198 IPR003439 GO:0005524
Amo10g1708 385 Pfam Multicopper oxidase 324 381 IPR001117 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo10g1708 Amo-Chr10 60062031 60066531 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo10g1708 134 223 Calmodulin-binding Proteins AT2G36910 35.417 5.69e-06 46.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo10g1708 K05681 - adu:107469544 340.502