Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo10g1634 ATGGGCCATTGCTGCAGCAAGAGCATCGCCGTCGATAACGAGGGCGCCGCCGCCAATCACCACGTCAAACCGCCGCATGTCTCGCCGGCGCCGGTAGCAGTAGGGAACAACTCCGTGTCTGGCGTCAGCGATGCTTCGACGGCCACTCCGGGGAGGAGTACTCCGGCGAACTCTTTCTCGACAAGCCCCTTCACAAGCCCGCTTCCGCCAGGGGTGGCGGCGTCGCCGGCGGCGAAGACGCCAGGGCGAAAATTCCGTTGGCCGCTGCCTCCCCCGTCACCGGCGAAGCCGATCATGGCGGCACTGCTGCGGAGGCAGGGGAAGACGAAGCCAAAAGACGGTCCCATACCGGAGGAGCAAGGTGAAGGCGGTGGTGGCGGTGCCGGCGCAGAAGGTGGAGAGCGGTCCCTTGATAAGAGCTTTGGTTATTTTAAGAACTTTGGTGCGAAGTTCGAGCTAGGAAAGGAAGTGGGTCGAGGGCATTTTGGTCATACTTGCTGGGCTAAAGGGAAGAAGGGTGACCTTAAGGGTCAATCAGTTGCCGTCAAAATCATATCCAAAGCTAAGATGACTTCAGCAATAGCAATTGAAGATGTTAGGAGGGAGGTGAAAATGTTGAAGGCCTTATCTGGTCATAAAAATTTGGTCAAGTTTCATGATGCATTTGAGGATGTCAATAATGTCTACATAGTAATGGAGTTGTGTGAGGGTGGAGAACTACTTGACAGAATTCTAGATAGAGGGGGAAGATACACAGAAGATGATGCGAAAGTTATTCTTTTACAAATTTTAGATGTAGTTGCCTTTTGCCATCTCCAAGGAGTTGTACATCGTGATCTAAAACCGGAGAATTTCCTTTTTCTCTCAAAACAAGAGGATGCTTTGATGAAAGCCATTGATTTTGGTCTATCTGATTTTGTTAGACCAGATCAACGCCTCAATGATATTGTTGGCAGTGCCTACTATGTCGCACCTGAAGTGCTGCATAGATCTTACAGTGTTGAGGCAGACCTATGGAGTATTGGAGTTATATCGTACATATTGTTATGTGGAAGTAGACCATTTTGGGCACGCACTGAATCAGGAATATTCCGGTCTGTGTTAAGAGCAAATCCTAACTTTGACGATACACCTTGGCCATCAATATCACCAGAAGCTAAAGACTTTGTTAAGAGACTATTGAACAAGGACCACAGGAAAAGGATGACTGCTGCCCAAGCTCTAACTCATCCGTGGTTGAGGAATGAAAACGTTCCCATTCCTTTAGATATTTTGATTTACAAGTTAGTCAAGTCATATGTGCGTGCCTCACCTTTGAAGCGTGCAGCATTGAAGGCTCTCTCAAAAGCATTGACAGAAGACGAACTTATCTACCTTAGAGCGCAGTTTAGCCTTCTGGAACCAAAAGACGGCTATGTTTCACTCGATAATTTTAGAGGGGCTCTTATGAAAAATTCAACTGATGCCATGAAGGAATCAAGGGTCCCTGAGATTTTACATTTGATGGAGGCACTCTCATATAAAAAAATGGACTTCGAAGAGTTCTGCGCCGCTGCAATCAGTGTATACCAGCTGGAGGTTCATCCGGATTGGGACAACATGGCTACCACAGCGTTTGAGCATTTTGAAGAGGCGGGGAACCGAGTTATTTCAGTAGAGGAGTTGGCACAGGAGATGAGTTTGGGACCTTCAGCTTATGCTCTAATGGGTGATTGGATCCGAAAATCCGATGGAAAACTCAGCTTCGTCGGATTCACAAAGTTTTTGCACGGCGTGACGCTTCGCAGTTCAAACACAAGACATCACAGACCGGTAGTATAG 1821 0.4783 MGHCCSKSIAVDNEGAAANHHVKPPHVSPAPVAVGNNSVSGVSDASTATPGRSTPANSFSTSPFTSPLPPGVAASPAAKTPGRKFRWPLPPPSPAKPIMAALLRRQGKTKPKDGPIPEEQGEGGGGGAGAEGGERSLDKSFGYFKNFGAKFELGKEVGRGHFGHTCWAKGKKGDLKGQSVAVKIISKAKMTSAIAIEDVRREVKMLKALSGHKNLVKFHDAFEDVNNVYIVMELCEGGELLDRILDRGGRYTEDDAKVILLQILDVVAFCHLQGVVHRDLKPENFLFLSKQEDALMKAIDFGLSDFVRPDQRLNDIVGSAYYVAPEVLHRSYSVEADLWSIGVISYILLCGSRPFWARTESGIFRSVLRANPNFDDTPWPSISPEAKDFVKRLLNKDHRKRMTAAQALTHPWLRNENVPIPLDILIYKLVKSYVRASPLKRAALKALSKALTEDELIYLRAQFSLLEPKDGYVSLDNFRGALMKNSTDAMKESRVPEILHLMEALSYKKMDFEEFCAAAISVYQLEVHPDWDNMATTAFEHFEEAGNRVISVEELAQEMSLGPSAYALMGDWIRKSDGKLSFVGFTKFLHGVTLRSSNTRHHRPVV* 607
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo10g1634 606 SMART serkin_6 151 413 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo10g1634 606 PANTHER CDPK-RELATED KINASE 3 52 596 - -
Amo10g1634 606 ProSitePatterns Protein kinases ATP-binding region signature. 157 183 IPR017441 GO:0005524
Amo10g1634 606 SUPERFAMILY Protein kinase-like (PK-like) 150 437 IPR011009 -
Amo10g1634 606 SUPERFAMILY EF-hand 446 591 IPR011992 -
Amo10g1634 606 Gene3D Phosphorylase Kinase; domain 1 145 240 - -
Amo10g1634 606 MobiDBLite consensus disorder prediction 19 132 - -
Amo10g1634 606 PANTHER SERINE/THREONINE-PROTEIN KINASE 52 596 - -
Amo10g1634 606 ProSiteProfiles Protein kinase domain profile. 151 413 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo10g1634 606 Gene3D - 430 588 - -
Amo10g1634 606 MobiDBLite consensus disorder prediction 33 68 - -
Amo10g1634 606 Pfam Protein kinase domain 151 413 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo10g1634 606 CDD STKc_CAMK 150 412 - -
Amo10g1634 606 ProSitePatterns Serine/Threonine protein kinases active-site signature. 275 287 IPR008271 GO:0004672|GO:0006468
Amo10g1634 606 Gene3D Transferase(Phosphotransferase) domain 1 241 429 - -
Amo10g1634 606 Gene3D - 452 520 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo10g1634 Amo-Chr10 57334778 57341076 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo10g1634 1 596 EF-hand Containing Proteins AT3G50530 58.204 0.0 724
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Amo10g1634 Pkinase 1.5e-68 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo10g1634 - - var:108331904 997.653