Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo10g1628 ATGGAGGAAGAAGAAGAAGAATCGTTCATAATGCATGGCGATAACCAGCAGAAGCATCAGCATCAGGACAACAATATGATGAGTTTTCACCTTCACATACCGCATCTCCATTTCAACCACCACGAGAAGAAGGAGGATCTGAAGGACATACCGAAGGGGTGCTTGGCGATCATGGTGGGCCAAGGAGAAGAGCAACAGAGGTTTGTTATTCCTGTTATATACTTCAACCACCCACTCTTCTTGCAGCTCCTCAAAGAAGCTGAAGACGAGTACGGTTTCGATCAGAAAGGACCTATCACCATACCCTGCCACGTCCAACACTTTCGCACCGTCCAGGATATCATTCATAGGGACAAATCTCACCACTTCCATCACCACCACCACCATAATCATCATCATGCCTGGTGCTTCAAAGTTTGA 420 0.4667 MEEEEEESFIMHGDNQQKHQHQDNNMMSFHLHIPHLHFNHHEKKEDLKDIPKGCLAIMVGQGEEQQRFVIPVIYFNHPLFLQLLKEAEDEYGFDQKGPITIPCHVQHFRTVQDIIHRDKSHHFHHHHHHNHHHAWCFKV* 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo10g1628 139 Pfam Auxin responsive protein 44 112 IPR003676 GO:0009733
Amo10g1628 139 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY 28 132 - -
Amo10g1628 139 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 28 132 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo10g1628 Amo-Chr10 56907007 56908653 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo10g1628 49 109 Calmodulin-binding Proteins AT5G20810 54.098 8.58e-18 73.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo10g1628 K14488 - gmx:100526867 197.978