Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo10g1623 ATGGCAACTACAACTACTAAAATTGTAGAAGCTAGGGTTTCTGAAGAAGGGATCATTAAAACATTTCATAATGACGATGATGAAGCGCTCGATGCTGCGGAGAATGGAGTTGCGTCTCATCGTCCAGTGGGGCAAGATGACTACGAGGTTGTGAGGAAGGTGGGAAGAGGGAAATATAGTGAGGTCTTTGTGGGTGTTTACTCCACCGATAATGAAAAATGCATCATCAAGATCCTCAAACCCGTCAAGAAGAAAAAGTTAAAGAGGGAGATCAAAATATTGCATAATCTTTGTGGAGGTCCCAATGTTATAAAGCTGCTTGACATTGTTAGGGACTAG 339 0.4189 MATTTTKIVEARVSEEGIIKTFHNDDDEALDAAENGVASHRPVGQDDYEVVRKVGRGKYSEVFVGVYSTDNEKCIIKILKPVKKKKLKREIKILHNLCGGPNVIKLLDIVRD* 113
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo10g1623 112 ProSiteProfiles Protein kinase domain profile. 48 112 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo10g1623 112 PANTHER BNAA04G13490D PROTEIN 44 112 - -
Amo10g1623 112 Gene3D Phosphorylase Kinase; domain 1 37 112 - -
Amo10g1623 112 PANTHER CASEIN KINASE II SUBUNIT ALPHA 44 112 IPR045216 GO:0004674|GO:0006468
Amo10g1623 112 SUPERFAMILY Protein kinase-like (PK-like) 40 112 IPR011009 -
Amo10g1623 112 ProSitePatterns Protein kinases ATP-binding region signature. 54 77 IPR017441 GO:0005524
Amo10g1623 112 Pfam Protein kinase domain 48 111 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo10g1623 Amo-Chr10 56636721 56637554 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo10g1623 45 112 EF-hand Containing Proteins AT2G38910 31.081 4.46e-06 42.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CK2 Amo10g1623 Pkinase 5e-09 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo10g1623 K03097 - adu:107469801 168.318