Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo10g1617 GGCAACCAAAGCACCACTTGCTTACAATTGGATGGAGTCTATTTACATGAAAAGCAGCAGCTTCTTTTGAGCATCAAGCGAGCTAACAGGCAACCAGCCAACATATCATCCTCGATATTGTCAAGTTATAGTATGCAAATTGGGATTCTTGCGGCAGTTGCTCATGCTACTGCAAATAATAGTCCCTTTACCATATTTTACAATCCTAGGGCTAGTCCTTCAGAGTTTGTTATTCTTTTAGCCAAGTACTACAAGGTAGTGTTTCTATTCTCCTTTTCAGAGTTTGTGAGATGGAAAAATTCACAATGGCATAATTTGCAGGTATAA 327 0.3914 GNQSTTCLQLDGVYLHEKQQLLLSIKRANRQPANISSSILSSYSMQIGILAAVAHATANNSPFTIFYNPRASPSEFVILLAKYYKVVFLFSFSEFVRWKNSQWHNLQV* 109
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo10g1617 108 PANTHER AUXIN RESPONSE FACTOR 16 88 - -
Amo10g1617 108 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 16 88 IPR044835 GO:0003677|GO:0006355|GO:0009725
Amo10g1617 108 Pfam Auxin response factor 53 86 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo10g1617 Amo-Chr10 56100954 56101635 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo10g1617 16 108 B3 DNA Binding Superfamily AT1G19850 45.082 4.46e-22 87.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo10g1617 - - adu:107494169 155.221