Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo10g1595 ATGGCTTCAATTGGGATGTCAGAGATGCTTGAAAACCCCATCAAGCTGAATGGTGTAGCAAGGTCAGCACCATCAGCTTCTAGCCCTGCCACCTTCGAGACTGCGGCTCTCTTTGGTAAGAAGAAGGCAGCACCCCCTCCTCCTTTAAAGAAAGCTAATGCTGTTGTCACTCCTGCCAATGATGAACTCACCAAGTGGTATGGTCCTGACAGAAGGATCTTCTTACCAGAGGGTCTCTTGGACCGATCCAAGATCCCAACATACTTGACTGGAGAAGTGCCCGGAGATATACTGGTTGATCCCTTTTTTCTGATGCTTTGGCATCGTACCTCGTTAAACTTCATGCAAAATGTAGTTAATGGATACCAGAGTCCTTTCTTCCTTATTCCTTCCTCCAACTACTTGGAACTTCTCGCAAATCTCTTGGACCGTGAAAATTGGTCACTGGTTCAATTCATGTCATTTTCTTACAGTGGATATGGCACCTCCAGCTTGCAACAAGTAAAAAAGTTCACAAATCTTCTAGAAACGATTATGTATGATCTAAGGAAAGGAAGTTTAAGAGGGCTAGAGGAAGGAGGAACAGCAAAGAAAATAGATTTTAAGTTGTATTGTTTCTGTATGTTTTCAACTTTTAGTTTTGGAATTCGAACTCGAGATTTATTTTGTATTTGA 675 0.4207 MASIGMSEMLENPIKLNGVARSAPSASSPATFETAALFGKKKAAPPPPLKKANAVVTPANDELTKWYGPDRRIFLPEGLLDRSKIPTYLTGEVPGDILVDPFFLMLWHRTSLNFMQNVVNGYQSPFFLIPSSNYLELLANLLDRENWSLVQFMSFSYSGYGTSSLQQVKKFTNLLETIMYDLRKGSLRGLEEGGTAKKIDFKLYCFCMFSTFSFGIRTRDLFCI* 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo10g1595 224 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 2 104 IPR001344 GO:0009765|GO:0016020
Amo10g1595 224 PANTHER CHLOROPHYLL A-B BINDING PROTEIN, CHLOROPLASTIC 2 104 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo10g1595 Amo-Chr10 54878567 54880374 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo10g1595 1 104 Chloroplast and Mitochondria Gene Families AT4G10340 55.238 2.22e-23 93.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo10g1595 K08916 - ahf:112736459 138.658