Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo10g1580 ATGGGTGAAGAATTGAGCTATTGTGAGAAAGTTCGTGCATGGTTCACAAAATCAAAGGCATTTTTGCTAATATTAAGCTTGCAATTTGGGTCAGCGGGCATGTACATTATCACCATGGATGCTCTAAACAAGGGATTGAGTCATTATGTCTTTGTTGTTTATCGTAATGTTGTTGCCACTCTCGCTCTTGGCCCCTTCGCTTTTTTCCTTGAAAGGAAAGTTAGGCCCAAGATGACACCTCGGATATTTGCAGAGATTGTGGCACTGGCTTTTATAGAGATTATACTTGATCAATGCTTCACCTTCCTGGGAATGAAATTAACTTCAGCATCTTTTGCATCTGCTGTGATGAACTCTGTACCCTCCATAACCTTTGTGCTGGCAATTATTTTTAGATTGGAGCGCATGAACATTAGGAACATAGGATGCCAAGCGAAAGTGACAGGCACTGTGGTAAGTCTTGGAGGCGCTATTCTAATGGCAATGTACAAAGGTCCTATTCTTAACATTGTGACGTCATCAACAACCCATGTGGCCCACAATGGGAATAATGCTAACGCCACTGCTGACCACTGGCTCATGGGTGCTATCTTCATTCTAATAGGCTGTGCTGGCTTCTCTGGTTTCTACATATTGCAAGCAATAACATTGAGAAAGTACCCAGCAGAGATGTCCCTAGCCACGTGGGTATGCTTTATTGGTGCAATTCAAAGCAGTGCAGTTACTGCTTACATGGAGCGTGATTCTCCTCAAGTCTGGATTCTGGCTCCTGATTCTAGGCTTCTTGCCTGTTTATATGCGGGAGTAGTAACATCAGCAATACAGTTCTATGTGCAAGGGCTGGTGATTAAAACAACGGGTCCAGTATTTGTGACTGCTTTCAATCCCCTGCGTATGATCATAGTCACAGCCTTCGCTTCCATACTCCTTTCTGAGAAGCTCTACCTAGGAAGTGTTATTGGAGGAGTAGTGGTGGTTGTAGGGCTTTATTTGGTTGTGTGGGGAAAATCTAAAGAGAAGAAAGGCGTAAAACATGCGATGCTGCCACCATCCCCTGAAAAAGAAATCCAACAACAGCAGCTACCAGTTACTGTTCCCAGAAATTTTGATGCCAGCAACAATAATAATAATGATGACGACGATGATAATAATATGGATCATCAACTTATGGTCGTGGTTGGAATCAAGAACAACGACGTTGAAGCAAGAAGATCATCATCATGTTAG 1227 0.4287 MGEELSYCEKVRAWFTKSKAFLLILSLQFGSAGMYIITMDALNKGLSHYVFVVYRNVVATLALGPFAFFLERKVRPKMTPRIFAEIVALAFIEIILDQCFTFLGMKLTSASFASAVMNSVPSITFVLAIIFRLERMNIRNIGCQAKVTGTVVSLGGAILMAMYKGPILNIVTSSTTHVAHNGNNANATADHWLMGAIFILIGCAGFSGFYILQAITLRKYPAEMSLATWVCFIGAIQSSAVTAYMERDSPQVWILAPDSRLLACLYAGVVTSAIQFYVQGLVIKTTGPVFVTAFNPLRMIIVTAFASILLSEKLYLGSVIGGVVVVVGLYLVVWGKSKEKKGVKHAMLPPSPEKEIQQQQLPVTVPRNFDASNNNNNDDDDDNNMDHQLMVVVGIKNNDVEARRSSSC* 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo10g1580 408 PANTHER WAT1-RELATED PROTEIN 15 368 - -
Amo10g1580 408 SUPERFAMILY Multidrug resistance efflux transporter EmrE 253 339 - -
Amo10g1580 408 PANTHER WAT1-RELATED PROTEIN 15 368 IPR030184 GO:0016021|GO:0022857
Amo10g1580 408 SUPERFAMILY Multidrug resistance efflux transporter EmrE 54 163 - -
Amo10g1580 408 Pfam EamA-like transporter family 31 160 IPR000620 GO:0016020|GO:0016021
Amo10g1580 408 Pfam EamA-like transporter family 194 333 IPR000620 GO:0016020|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo10g1580 Amo-Chr10 53765387 53770306 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo10g1580 19 382 Nodulin-like Gene Family AT2G39510 44.505 1.04e-112 333
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo10g1580 - - ahf:112715649 765.377