Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo10g1579 ATGTTCCTCTGTGTTCTCTGTCTCTGTGTTCCTCTGTGTTCTCTAGCAAACCCTGGATCAAGTACTTCTACGGACCTGAAAGGAGAAAGTTTCTCTGGTCTTTTAGGAACTCATTATAGGCTAGGTTTCTGGAGAAAAGCAGTCCTTTTATACTGGGCTAGTATATCAGAAGTGGTAAATAGTATGAAGGACTTGATAGATTACAGCAGAGAGACAGGGACTGGACCCATGGGTAAGCTTATATGCATTTTACTAGTTCATTGCTCTCTTTTGCCCCTACTGCATAAAGATCTTTTTGCATCTGGATTACGCAAGAGATCCAGCATTCTTCTGTACGATCCTCTTGGAACTGGCAGAGCTTTTAATAGTTGTGGTTTCGCTACTGTTGCCACTGCCACCTCTCTTGGTTTGCTTCTGCTGTGGTTTTCGATGGATGTCTCCAAAGATTGGATGGATACGCCCCGTCATTTGAAAGAATATCAACTTGGTGTAGAAAGGTTTTTACATTTTGCTTTTTCATCAGCGGGAATTCCTCAAGGGGAAGAAATTCAATGCCCATGTAAAAAGTGCTGTAATAGACTTTGGTTAAAGAGAGATGACGTGTATAACCATTTAATATACCATGGATTTGTAGAAGGTTATAGGCGGTGGTTTAATCATGGAGAATCACTTGTTGCTATGGATGTTGACAATGACACGGATGGTGAATATAACTGTAATGATAACATTGATGAGCAGTTACGTGATAGATTCAGAGATACTACATAA 768 0.4036 MFLCVLCLCVPLCSLANPGSSTSTDLKGESFSGLLGTHYRLGFWRKAVLLYWASISEVVNSMKDLIDYSRETGTGPMGKLICILLVHCSLLPLLHKDLFASGLRKRSSILLYDPLGTGRAFNSCGFATVATATSLGLLLLWFSMDVSKDWMDTPRHLKEYQLGVERFLHFAFSSAGIPQGEEIQCPCKKCCNRLWLKRDDVYNHLIYHGFVEGYRRWFNHGESLVAMDVDNDTDGEYNCNDNIDEQLRDRFRDTT* 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo10g1579 255 Pfam Transposase-associated domain 148 222 IPR029480 -
Amo10g1579 255 PANTHER - 151 246 - -
Amo10g1579 255 PANTHER UNCHARACTERIZED 151 246 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo10g1579 Amo-Chr10 53756138 53760391 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo10g1579 55 80 C2H2 Transcription Factor Family AT1G43850 84.615 1.02e-06 47.8